Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2079

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,407,783	+				+0.6
2,407,784	-				-0.0
2,407,976	+				-0.4
2,407,976	+				-0.0
2,407,976	+				-2.0
2,408,009	+				-1.1
2,408,009	+				-0.0
2,408,010	-				-0.0
2,408,042	+				-1.0
2,408,043	-				-0.0
2,408,146	-		Rru_A2079	0.14	-1.0
2,408,146	-		Rru_A2079	0.14	-0.0
2,408,147	+		Rru_A2079	0.14	-0.6
2,408,147	+		Rru_A2079	0.14	-0.3
2,408,147	+		Rru_A2079	0.14	-0.0
2,408,148	-		Rru_A2079	0.14	-0.3
2,408,201	+		Rru_A2079	0.18	-0.0
2,408,202	-		Rru_A2079	0.18	-0.0
2,408,234	+		Rru_A2079	0.20	-2.0
2,408,235	-		Rru_A2079	0.20	-1.2
2,408,294	+		Rru_A2079	0.25	-0.0
2,408,295	-		Rru_A2079	0.25	-0.8
2,408,295	-		Rru_A2079	0.25	-1.0
2,408,424	-		Rru_A2079	0.34	-1.6
2,408,490	+		Rru_A2079	0.39	-1.0
2,408,491	-		Rru_A2079	0.39	-1.0
2,408,491	-		Rru_A2079	0.39	-0.0
2,408,491	-		Rru_A2079	0.39	-0.0
2,408,582	+		Rru_A2079	0.46	-0.0
2,408,582	+		Rru_A2079	0.46	-0.0
2,408,582	+		Rru_A2079	0.46	-0.0
2,408,582	+		Rru_A2079	0.46	-0.0
2,408,583	-		Rru_A2079	0.46	-0.4
2,408,589	+		Rru_A2079	0.46	-0.0
2,408,741	+		Rru_A2079	0.57	-0.0
2,408,747	+		Rru_A2079	0.58	-0.0
2,408,747	+		Rru_A2079	0.58	-0.0
2,408,747	+		Rru_A2079	0.58	-1.3
2,408,747	+		Rru_A2079	0.58	-0.0
2,408,747	+		Rru_A2079	0.58	-0.0
2,408,748	-		Rru_A2079	0.58	-0.0
2,408,748	-		Rru_A2079	0.58	-0.0
2,408,748	-		Rru_A2079	0.58	-0.0
2,408,795	+		Rru_A2079	0.61	-0.0
2,408,795	+		Rru_A2079	0.61	-0.8
2,408,795	+		Rru_A2079	0.61	-0.0
2,408,883	-		Rru_A2079	0.68	+0.8
2,408,931	-		Rru_A2079	0.71	-0.0
2,409,032	+		Rru_A2079	0.79	-1.0
2,409,032	+		Rru_A2079	0.79	-0.0
2,409,033	-		Rru_A2079	0.79	-0.4
2,409,074	+		Rru_A2079	0.82	+0.8
2,409,074	+		Rru_A2079	0.82	-0.9
2,409,075	-		Rru_A2079	0.82	+0.3
2,409,075	-		Rru_A2079	0.82	-0.0
2,409,116	+		Rru_A2079	0.85	-1.1
2,409,230	-				-0.0
2,409,298	-				-0.0
2,409,298	-				-0.0
2,409,298	-				-1.0
2,409,335	+				-0.0
2,409,335	+				-0.0
2,409,336	-				+0.5
2,409,336	-				-0.0
2,409,343	+				-0.0
2,409,343	+				-0.0
2,409,344	-				-0.0
2,409,401	+				-0.4
2,409,401	+				-0.0
2,409,401	+				-1.0
2,409,407	+				-0.9
2,409,407	+				+1.8
2,409,407	+				-0.9
2,409,407	+				-0.0
2,409,430	+				-1.3
2,409,430	+				+0.6
2,409,430	+				-0.0
2,409,585	+		Rru_A2080	0.22	-1.0
2,409,585	+		Rru_A2080	0.22	+0.7
2,409,585	+		Rru_A2080	0.22	-0.0
2,409,585	+		Rru_A2080	0.22	-0.0
2,409,585	+		Rru_A2080	0.22	+1.1
2,409,585	+		Rru_A2080	0.22	-1.0
2,409,585	+		Rru_A2080	0.22	-0.1
2,409,586	-		Rru_A2080	0.22	-1.0
2,409,586	-		Rru_A2080	0.22	-0.0
2,409,586	-		Rru_A2080	0.22	-0.0
2,409,586	-		Rru_A2080	0.22	+0.9
2,409,587	+		Rru_A2080	0.23	-1.0
2,409,587	+		Rru_A2080	0.23	-0.1
2,409,587	+		Rru_A2080	0.23	-0.0
2,409,587	+		Rru_A2080	0.23	-0.0
2,409,587	+		Rru_A2080	0.23	-0.0
2,409,587	+		Rru_A2080	0.23	-1.0
2,409,587	+		Rru_A2080	0.23	-0.8
2,409,588	-		Rru_A2080	0.23	+0.9
2,409,588	-		Rru_A2080	0.23	-0.0
2,409,588	-		Rru_A2080	0.23	+1.4
2,409,588	-		Rru_A2080	0.23	+1.3
2,409,588	-		Rru_A2080	0.23	+0.9
2,409,911	+		Rru_A2080	0.76	-0.0
2,409,912	-		Rru_A2080	0.76	+1.6
2,409,912	-		Rru_A2080	0.76	+0.3
2,409,912	-		Rru_A2080	0.76	+1.0
2,409,932	+		Rru_A2080	0.80	-0.0
2,410,057	-				-0.0