Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2069

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,392,689	-				+1.2
2,392,714	-				-0.0
2,392,738	+				-0.3
2,392,739	-				+0.3
2,392,739	-				-0.0
2,392,739	-				+0.3
2,392,787	-				-0.0
2,392,884	-				-0.2
2,393,366	-				+0.2
2,393,391	+				-0.1
2,393,392	-				+1.3
2,393,439	+				-2.0
2,393,439	+				+0.1
2,393,439	+				-0.0
2,393,440	-				-0.0
2,393,440	-				+0.2
2,393,517	+				+0.5
2,393,619	+		Rru_A2069	0.12	-0.0
2,393,620	-		Rru_A2069	0.12	+0.3
2,393,620	-		Rru_A2069	0.12	-0.0
2,393,637	+		Rru_A2069	0.14	+0.4
2,393,637	+		Rru_A2069	0.14	-0.2
2,393,846	+		Rru_A2069	0.39	-0.0
2,393,846	+		Rru_A2069	0.39	-1.0
2,393,847	-		Rru_A2069	0.39	+0.5
2,393,847	-		Rru_A2069	0.39	-0.0
2,393,847	-		Rru_A2069	0.39	-0.0
2,393,850	+		Rru_A2069	0.39	-0.2
2,393,850	+		Rru_A2069	0.39	-1.0
2,393,851	-		Rru_A2069	0.39	+0.3
2,393,851	-		Rru_A2069	0.39	+0.1
2,393,890	+		Rru_A2069	0.44	-0.0
2,393,891	-		Rru_A2069	0.44	-1.0
2,394,051	+		Rru_A2069	0.63	+0.4
2,394,120	+		Rru_A2069	0.71	-1.0
2,394,121	-		Rru_A2069	0.71	+0.1
2,394,183	+		Rru_A2069	0.78	+0.1
2,394,183	+		Rru_A2069	0.78	-0.0
2,394,183	+		Rru_A2069	0.78	-0.0
2,394,183	+		Rru_A2069	0.78	+0.2
2,394,184	-		Rru_A2069	0.78	-1.0
2,394,184	-		Rru_A2069	0.78	+1.0
2,394,343	+				+0.2
2,394,432	-				+1.2
2,394,432	-				-0.0
2,394,441	+				-0.0
2,394,474	+				+0.2
2,394,475	-				+0.4
2,394,558	-				-0.0
2,394,558	-				+0.4
2,394,591	+				+0.6
2,394,591	+				-0.0
2,394,592	-				+1.3
2,394,592	-				+0.6
2,394,823	-		Rru_A2070	0.25	-0.1
2,394,902	+		Rru_A2070	0.32	-0.0
2,395,305	+		Rru_A2070	0.66	-0.0
2,395,306	-		Rru_A2070	0.66	+1.7
2,395,306	-		Rru_A2070	0.66	-2.0
2,395,306	-		Rru_A2070	0.66	-0.0
2,395,306	-		Rru_A2070	0.66	-0.1