Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2063

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,385,721	+				+0.0
2,385,808	+				-0.1
2,385,848	-				+0.6
2,386,037	+		Rru_A2062	0.28	+0.1
2,386,038	-		Rru_A2062	0.28	+2.9
2,386,130	+		Rru_A2062	0.52	+0.1
2,386,336	+				-0.2
2,386,336	+				+0.8
2,386,482	-				+1.0
2,386,556	+				+0.1
2,386,695	+		Rru_A2063	0.18	+0.2
2,386,695	+		Rru_A2063	0.18	-0.0
2,386,696	-		Rru_A2063	0.19	-0.0
2,386,920	+		Rru_A2063	0.52	-0.0
2,386,920	+		Rru_A2063	0.52	-1.0
2,386,921	-		Rru_A2063	0.52	-0.0
2,386,921	-		Rru_A2063	0.52	+0.8
2,386,921	-		Rru_A2063	0.52	-0.0
2,387,058	+		Rru_A2063	0.73	-1.0
2,387,180	+				+1.6
2,387,180	+				-0.0
2,387,180	+				-0.0
2,387,226	+				-0.0
2,387,226	+				+1.0
2,387,226	+				+0.6
2,387,226	+				-0.4
2,387,227	-				+0.1
2,387,227	-				-0.0
2,387,788	-		Rru_A2064	0.35	-1.6
2,387,788	-		Rru_A2064	0.35	-0.2
2,387,927	-		Rru_A2064	0.46	-0.2
2,387,966	+		Rru_A2064	0.49	+0.1
2,387,966	+		Rru_A2064	0.49	-0.0
2,388,183	+		Rru_A2064	0.66	-1.0
2,388,183	+		Rru_A2064	0.66	-0.0
2,388,184	-		Rru_A2064	0.67	-0.0
2,388,184	-		Rru_A2064	0.67	-0.0
2,388,185	+		Rru_A2064	0.67	+0.1
2,388,185	+		Rru_A2064	0.67	+1.6
2,388,185	+		Rru_A2064	0.67	-2.0