Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2061

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,384,242	+		Rru_A2060	0.82	+0.6
2,384,242	+		Rru_A2060	0.82	+0.5
2,384,259	+		Rru_A2060	0.82	-0.0
2,384,259	+		Rru_A2060	0.82	-0.0
2,384,260	-		Rru_A2060	0.82	-0.0
2,384,260	-		Rru_A2060	0.82	+0.6
2,384,260	-		Rru_A2060	0.82	-1.6
2,384,455	+		Rru_A2060	0.89	-0.1
2,384,455	+		Rru_A2060	0.89	-0.1
2,384,456	-		Rru_A2060	0.89	-0.7
2,384,457	+		Rru_A2060	0.89	-0.1
2,384,457	+		Rru_A2060	0.89	-1.1
2,384,457	+		Rru_A2060	0.89	+0.3
2,384,457	+		Rru_A2060	0.89	+0.7
2,384,458	-		Rru_A2060	0.89	+1.8
2,384,458	-		Rru_A2060	0.89	-2.1
2,384,631	+				-0.1
2,384,631	+				+0.8
2,384,631	+				+0.2
2,384,632	-				+0.0
2,384,632	-				-0.1
2,384,632	-				-1.1
2,384,946	+				+0.3
2,385,141	+		Rru_A2061	0.12	+0.7
2,385,142	-		Rru_A2061	0.12	+1.6
2,385,147	-		Rru_A2061	0.13	+1.5
2,385,348	+		Rru_A2061	0.46	+1.1
2,385,348	+		Rru_A2061	0.46	+0.4
2,385,349	-		Rru_A2061	0.46	+1.3
2,385,349	-		Rru_A2061	0.46	+1.0
2,385,349	-		Rru_A2061	0.46	-0.1
2,385,721	+				+0.0
2,385,808	+				-0.1
2,385,848	-				+0.6
2,386,037	+		Rru_A2062	0.28	+0.1
2,386,038	-		Rru_A2062	0.28	+2.9
2,386,130	+		Rru_A2062	0.52	+0.1
2,386,336	+				-0.2
2,386,336	+				+0.8
2,386,482	-				+1.0
2,386,556	+				+0.1