Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2041

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,360,784	+				-0.0
2,360,784	+				+0.5
2,360,784	+				-0.5
2,360,784	+				-0.0
2,360,784	+				-0.0
2,360,784	+				-0.0
2,360,785	-				+1.4
2,360,785	-				-0.0
2,360,785	-				-0.0
2,360,806	+				+0.3
2,360,811	+				+0.2
2,360,812	-				-0.0
2,360,812	-				-0.0
2,360,838	+				-0.0
2,360,838	+				-1.0
2,360,839	-				-0.0
2,360,839	-				-0.0
2,360,839	-				+1.2
2,360,839	-				+0.5
2,360,839	-				+1.2
2,360,839	-				-1.0
2,361,181	+		Rru_A2041	0.26	+0.0
2,361,181	+		Rru_A2041	0.26	-0.0
2,361,181	+		Rru_A2041	0.26	-0.8
2,361,232	+		Rru_A2041	0.29	+0.2
2,361,232	+		Rru_A2041	0.29	-0.0
2,361,232	+		Rru_A2041	0.29	+0.6
2,361,233	-		Rru_A2041	0.29	-0.0
2,361,236	+		Rru_A2041	0.30	+0.4
2,361,237	-		Rru_A2041	0.30	-0.2
2,361,237	-		Rru_A2041	0.30	+0.1
2,361,237	-		Rru_A2041	0.30	+0.5
2,361,237	-		Rru_A2041	0.30	-0.2
2,361,237	-		Rru_A2041	0.30	-0.0
2,361,238	+		Rru_A2041	0.30	+0.2
2,361,273	-		Rru_A2041	0.32	-0.0
2,361,290	-		Rru_A2041	0.33	-0.0
2,361,290	-		Rru_A2041	0.33	+0.2
2,361,290	-		Rru_A2041	0.33	-0.4
2,361,290	-		Rru_A2041	0.33	-0.0
2,361,290	-		Rru_A2041	0.33	-0.1
2,361,290	-		Rru_A2041	0.33	+1.1
2,361,290	-		Rru_A2041	0.33	-1.0
2,361,290	-		Rru_A2041	0.33	-1.0
2,361,326	+		Rru_A2041	0.36	+1.2
2,361,327	-		Rru_A2041	0.36	-0.0
2,361,327	-		Rru_A2041	0.36	-0.0
2,361,327	-		Rru_A2041	0.36	-0.0
2,361,327	-		Rru_A2041	0.36	+0.4
2,361,327	-		Rru_A2041	0.36	-0.0
2,361,328	+		Rru_A2041	0.36	+0.3
2,361,328	+		Rru_A2041	0.36	-0.0
2,361,328	+		Rru_A2041	0.36	-0.3
2,361,328	+		Rru_A2041	0.36	-0.0
2,361,329	-		Rru_A2041	0.36	-0.0
2,361,329	-		Rru_A2041	0.36	-1.4
2,361,329	-		Rru_A2041	0.36	-0.2
2,361,487	+		Rru_A2041	0.48	-0.9
2,361,488	-		Rru_A2041	0.48	-1.0
2,361,488	-		Rru_A2041	0.48	-0.3
2,361,650	-		Rru_A2041	0.60	-0.0
2,361,650	-		Rru_A2041	0.60	+0.4
2,361,674	+		Rru_A2041	0.62	+0.5
2,361,674	+		Rru_A2041	0.62	+0.0
2,361,674	+		Rru_A2041	0.62	-0.0
2,361,675	-		Rru_A2041	0.62	-0.0
2,361,754	+		Rru_A2041	0.67	+0.4
2,361,814	+		Rru_A2041	0.72	-0.0
2,361,814	+		Rru_A2041	0.72	-0.4
2,361,814	+		Rru_A2041	0.72	-0.0
2,361,814	+		Rru_A2041	0.72	+1.4
2,361,815	-		Rru_A2041	0.72	-0.9
2,361,815	-		Rru_A2041	0.72	+0.1
2,362,057	+		Rru_A2041	0.90	+0.2
2,362,057	+		Rru_A2041	0.90	+0.1
2,362,058	-		Rru_A2041	0.90	+0.9
2,362,058	-		Rru_A2041	0.90	-0.3
2,362,145	+				-0.3
2,362,145	+				+0.2
2,362,146	-				+0.0
2,362,147	+				-0.6
2,362,147	+				+0.1
2,362,147	+				-0.3
2,362,148	-				-0.0
2,362,162	+				-0.0
2,362,162	+				+0.2
2,362,162	+				-0.0
2,362,162	+				+1.0
2,362,163	-				-0.0
2,362,163	-				-0.9
2,362,163	-				-0.0
2,362,163	-				-1.0
2,362,348	+				-1.0
2,362,349	-				-0.0
2,362,349	-				-0.0
2,362,361	+				-1.0
2,362,370	+				-0.0
2,362,370	+				-0.6
2,362,370	+				+0.7
2,362,785	+		Rru_A2042	0.61	-1.0
2,362,785	+		Rru_A2042	0.61	-0.6
2,362,786	-		Rru_A2042	0.61	+0.0
2,362,786	-		Rru_A2042	0.61	-0.0
2,362,786	-		Rru_A2042	0.61	-1.0
2,362,880	+		Rru_A2042	0.78	+0.0
2,362,890	+		Rru_A2042	0.79	+0.6
2,362,891	-		Rru_A2042	0.80	-0.0
2,362,914	+		Rru_A2042	0.84	-0.0
2,362,914	+		Rru_A2042	0.84	+1.1
2,362,914	+		Rru_A2042	0.84	+1.5
2,362,915	-		Rru_A2042	0.84	-0.0
2,362,999	-				-0.1
2,363,004	+				+0.3
2,363,004	+				-0.0
2,363,017	+				+0.1
2,363,017	+				-0.0
2,363,018	-				-0.0
2,363,023	+				+0.9
2,363,024	-				+0.1