Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2040

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,358,399	+				-0.0
2,358,399	+				-0.0
2,358,399	+				+1.5
2,358,399	+				-1.0
2,358,400	-				-0.1
2,358,411	+				-0.0
2,358,411	+				-1.6
2,358,411	+				-0.0
2,358,411	+				-0.0
2,358,411	+				+1.7
2,358,411	+				-0.1
2,358,412	-				+0.5
2,358,412	-				+0.4
2,358,412	-				+0.7
2,358,412	-				+0.3
2,358,412	-				+0.6
2,358,412	-				-0.0
2,358,413	+				+0.4
2,358,414	-				+1.3
2,358,414	-				-1.0
2,358,414	-				-0.1
2,358,532	-				+0.7
2,358,532	-				+0.6
2,358,921	+		Rru_A2039	0.47	+0.5
2,358,922	-		Rru_A2039	0.47	+0.6
2,358,922	-		Rru_A2039	0.47	+1.3
2,358,922	-		Rru_A2039	0.47	+0.9
2,359,030	-		Rru_A2039	0.60	+1.5
2,359,173	+		Rru_A2039	0.77	+0.6
2,359,174	-		Rru_A2039	0.77	+0.4
2,359,174	-		Rru_A2039	0.77	+1.0
2,359,278	+		Rru_A2039	0.89	+0.9
2,359,279	-		Rru_A2039	0.89	+0.4
2,359,329	-				+1.2
2,359,329	-				-0.0
2,359,391	+				+0.7
2,359,391	+				-0.0
2,359,391	+				-0.0
2,359,391	+				-0.0
2,359,391	+				-0.0
2,359,392	-				-0.0
2,359,392	-				-0.0
2,359,392	-				-0.0
2,359,392	-				+1.6
2,359,392	-				-0.0
2,360,784	+				-0.0
2,360,784	+				+0.5
2,360,784	+				-0.5
2,360,784	+				-0.0
2,360,784	+				-0.0
2,360,784	+				-0.0
2,360,785	-				+1.4
2,360,785	-				-0.0
2,360,785	-				-0.0
2,360,806	+				+0.3
2,360,811	+				+0.2
2,360,812	-				-0.0
2,360,812	-				-0.0
2,360,838	+				-0.0
2,360,838	+				-1.0
2,360,839	-				-0.0
2,360,839	-				-0.0
2,360,839	-				+1.2
2,360,839	-				+0.5
2,360,839	-				+1.2
2,360,839	-				-1.0
2,361,181	+		Rru_A2041	0.26	+0.0
2,361,181	+		Rru_A2041	0.26	-0.0
2,361,181	+		Rru_A2041	0.26	-0.8
2,361,232	+		Rru_A2041	0.29	+0.2
2,361,232	+		Rru_A2041	0.29	-0.0
2,361,232	+		Rru_A2041	0.29	+0.6
2,361,233	-		Rru_A2041	0.29	-0.0
2,361,236	+		Rru_A2041	0.30	+0.4
2,361,237	-		Rru_A2041	0.30	-0.2
2,361,237	-		Rru_A2041	0.30	+0.1
2,361,237	-		Rru_A2041	0.30	+0.5
2,361,237	-		Rru_A2041	0.30	-0.2
2,361,237	-		Rru_A2041	0.30	-0.0
2,361,238	+		Rru_A2041	0.30	+0.2
2,361,273	-		Rru_A2041	0.32	-0.0
2,361,290	-		Rru_A2041	0.33	-0.0
2,361,290	-		Rru_A2041	0.33	+0.2
2,361,290	-		Rru_A2041	0.33	-0.4
2,361,290	-		Rru_A2041	0.33	-0.0
2,361,290	-		Rru_A2041	0.33	-0.1
2,361,290	-		Rru_A2041	0.33	+1.1
2,361,290	-		Rru_A2041	0.33	-1.0
2,361,290	-		Rru_A2041	0.33	-1.0
2,361,326	+		Rru_A2041	0.36	+1.2
2,361,327	-		Rru_A2041	0.36	-0.0
2,361,327	-		Rru_A2041	0.36	-0.0
2,361,327	-		Rru_A2041	0.36	-0.0
2,361,327	-		Rru_A2041	0.36	+0.4
2,361,327	-		Rru_A2041	0.36	-0.0
2,361,328	+		Rru_A2041	0.36	+0.3
2,361,328	+		Rru_A2041	0.36	-0.0
2,361,328	+		Rru_A2041	0.36	-0.3
2,361,328	+		Rru_A2041	0.36	-0.0
2,361,329	-		Rru_A2041	0.36	-0.0
2,361,329	-		Rru_A2041	0.36	-1.4
2,361,329	-		Rru_A2041	0.36	-0.2