Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2038

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,354,212	-		Rru_A2037	0.77	-0.3
2,354,312	+		Rru_A2037	0.80	-0.0
2,354,312	+		Rru_A2037	0.80	-0.0
2,354,313	-		Rru_A2037	0.80	-1.6
2,354,313	-		Rru_A2037	0.80	+2.3
2,354,313	-		Rru_A2037	0.80	-0.0
2,354,606	+		Rru_A2037	0.89	+0.8
2,354,606	+		Rru_A2037	0.89	+0.5
2,354,607	-		Rru_A2037	0.89	-1.0
2,354,683	-				-0.0
2,354,846	+				-0.0
2,354,846	+				-0.0
2,354,846	+				-0.0
2,354,848	+				-0.0
2,354,969	+				+0.1
2,354,970	-				+0.9
2,354,970	-				-0.0
2,355,265	-				-0.0
2,355,265	-				-1.6
2,355,617	+		Rru_A2038	0.16	-3.0
2,355,618	-		Rru_A2038	0.16	-0.0
2,355,738	+		Rru_A2038	0.19	-0.0
2,355,738	+		Rru_A2038	0.19	-1.0
2,355,738	+		Rru_A2038	0.19	-0.0
2,355,738	+		Rru_A2038	0.19	-0.0
2,355,739	-		Rru_A2038	0.19	-2.0
2,355,739	-		Rru_A2038	0.19	-0.0
2,355,795	+		Rru_A2038	0.21	-2.8
2,355,796	-		Rru_A2038	0.21	-1.0
2,355,796	-		Rru_A2038	0.21	-1.6
2,355,876	+		Rru_A2038	0.23	-0.0
2,355,876	+		Rru_A2038	0.23	-0.0
2,355,879	+		Rru_A2038	0.23	-2.6
2,355,879	+		Rru_A2038	0.23	-0.0
2,355,999	+		Rru_A2038	0.27	-0.0
2,355,999	+		Rru_A2038	0.27	-1.6
2,356,269	+		Rru_A2038	0.35	-2.0
2,356,275	+		Rru_A2038	0.35	-1.6
2,356,276	-		Rru_A2038	0.35	-2.6
2,356,276	-		Rru_A2038	0.35	-1.0
2,356,443	+		Rru_A2038	0.40	-2.8
2,356,444	-		Rru_A2038	0.40	-0.0
2,357,302	-		Rru_A2038	0.64	-0.0
2,357,302	-		Rru_A2038	0.64	-0.0
2,357,302	-		Rru_A2038	0.64	-1.0
2,357,302	-		Rru_A2038	0.64	-0.0
2,357,305	-		Rru_A2038	0.65	-2.6
2,357,367	+		Rru_A2038	0.66	-1.6
2,357,474	+		Rru_A2038	0.69	-0.0
2,357,474	+		Rru_A2038	0.69	-1.0
2,357,475	-		Rru_A2038	0.69	-0.0
2,357,475	-		Rru_A2038	0.69	-0.0
2,357,475	-		Rru_A2038	0.69	-0.0
2,357,475	-		Rru_A2038	0.69	-1.0
2,357,475	-		Rru_A2038	0.69	-2.0
2,357,600	+		Rru_A2038	0.73	-1.0
2,357,656	+		Rru_A2038	0.75	-0.0
2,357,657	-		Rru_A2038	0.75	-1.6
2,358,070	+		Rru_A2038	0.87	+0.6
2,358,071	-		Rru_A2038	0.87	-0.4
2,358,171	+		Rru_A2038	0.90	-0.0
2,358,171	+		Rru_A2038	0.90	+0.5
2,358,171	+		Rru_A2038	0.90	-0.0
2,358,171	+		Rru_A2038	0.90	+0.4
2,358,172	-		Rru_A2038	0.90	-0.0
2,358,172	-		Rru_A2038	0.90	-0.0
2,358,177	+		Rru_A2038	0.90	-1.0
2,358,372	+				-0.0
2,358,372	+				-0.0
2,358,372	+				-0.0
2,358,399	+				-0.0
2,358,399	+				-0.0
2,358,399	+				+1.5
2,358,399	+				-1.0
2,358,400	-				-0.1
2,358,411	+				-0.0
2,358,411	+				-1.6
2,358,411	+				-0.0
2,358,411	+				-0.0
2,358,411	+				+1.7
2,358,411	+				-0.1
2,358,412	-				+0.5
2,358,412	-				+0.4
2,358,412	-				+0.7
2,358,412	-				+0.3
2,358,412	-				+0.6
2,358,412	-				-0.0
2,358,413	+				+0.4
2,358,414	-				+1.3
2,358,414	-				-1.0
2,358,414	-				-0.1
2,358,532	-				+0.7
2,358,532	-				+0.6
2,358,921	+		Rru_A2039	0.47	+0.5
2,358,922	-		Rru_A2039	0.47	+0.6
2,358,922	-		Rru_A2039	0.47	+1.3
2,358,922	-		Rru_A2039	0.47	+0.9
2,359,030	-		Rru_A2039	0.60	+1.5
2,359,173	+		Rru_A2039	0.77	+0.6
2,359,174	-		Rru_A2039	0.77	+0.4
2,359,174	-		Rru_A2039	0.77	+1.0
2,359,278	+		Rru_A2039	0.89	+0.9
2,359,279	-		Rru_A2039	0.89	+0.4
2,359,329	-				+1.2
2,359,329	-				-0.0
2,359,391	+				+0.7
2,359,391	+				-0.0
2,359,391	+				-0.0
2,359,391	+				-0.0
2,359,391	+				-0.0
2,359,392	-				-0.0
2,359,392	-				-0.0
2,359,392	-				-0.0
2,359,392	-				+1.6
2,359,392	-				-0.0