Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2035

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,349,413	+		Rru_A2034	0.43	-0.8
2,349,414	-		Rru_A2034	0.43	+1.1
2,349,414	-		Rru_A2034	0.43	-2.4
2,349,520	+		Rru_A2034	0.50	+0.6
2,349,520	+		Rru_A2034	0.50	-2.9
2,349,520	+		Rru_A2034	0.50	+1.2
2,349,520	+		Rru_A2034	0.50	-0.4
2,349,520	+		Rru_A2034	0.50	-2.8
2,349,520	+		Rru_A2034	0.50	-0.0
2,349,521	-		Rru_A2034	0.50	+1.5
2,349,521	-		Rru_A2034	0.50	+1.3
2,349,521	-		Rru_A2034	0.50	+1.4
2,349,521	-		Rru_A2034	0.50	+1.5
2,349,521	-		Rru_A2034	0.50	+1.7
2,349,521	-		Rru_A2034	0.50	+1.4
2,349,521	-		Rru_A2034	0.50	+1.4
2,349,521	-		Rru_A2034	0.50	+1.5
2,349,521	-		Rru_A2034	0.50	+2.4
2,349,521	-		Rru_A2034	0.50	+1.4
2,349,521	-		Rru_A2034	0.50	+1.2
2,349,521	-		Rru_A2034	0.50	+1.6
2,349,521	-		Rru_A2034	0.50	+1.7
2,349,521	-		Rru_A2034	0.50	+1.5
2,349,521	-		Rru_A2034	0.50	+1.4
2,349,521	-		Rru_A2034	0.50	+1.7
2,349,521	-		Rru_A2034	0.50	+1.3
2,349,521	-		Rru_A2034	0.50	+1.6
2,349,551	-		Rru_A2034	0.52	+1.0
2,350,238	+				-0.0
2,350,239	-				+2.2
2,350,239	-				+2.1
2,350,240	+				-0.0
2,350,240	+				-0.0
2,350,241	-				+2.2
2,350,241	-				+2.4
2,350,241	-				+2.2
2,350,241	-				+2.2
2,350,241	-				+2.3
2,350,241	-				+1.7
2,350,241	-				+2.1
2,350,241	-				+2.1
2,350,241	-				+2.6
2,350,241	-				+2.0
2,350,241	-				+2.0
2,350,267	+				-0.6
2,350,605	+		Rru_A2035	0.33	+2.1
2,350,605	+		Rru_A2035	0.33	+2.1
2,350,605	+		Rru_A2035	0.33	+2.1
2,350,605	+		Rru_A2035	0.33	+2.2
2,350,605	+		Rru_A2035	0.33	+2.1
2,350,606	-		Rru_A2035	0.33	+2.2
2,350,625	+		Rru_A2035	0.35	+2.2
2,350,626	-		Rru_A2035	0.35	+1.8
2,350,626	-		Rru_A2035	0.35	+2.9
2,350,626	-		Rru_A2035	0.35	+2.2
2,350,841	+		Rru_A2035	0.56	+2.4
2,350,841	+		Rru_A2035	0.56	+2.2
2,350,842	-		Rru_A2035	0.56	+2.2
2,351,120	+		Rru_A2035	0.83	+2.3
2,351,120	+		Rru_A2035	0.83	+2.2
2,351,120	+		Rru_A2035	0.83	+2.5
2,351,121	-		Rru_A2035	0.83	+2.3
2,351,121	-		Rru_A2035	0.83	+2.6
2,351,121	-		Rru_A2035	0.83	+2.3
2,351,121	-		Rru_A2035	0.83	+2.2
2,351,121	-		Rru_A2035	0.83	+1.4
2,351,141	-		Rru_A2035	0.85	+2.3
2,351,147	+		Rru_A2035	0.86	+2.3
2,351,148	-		Rru_A2035	0.86	+2.2
2,351,148	-		Rru_A2035	0.86	+2.2
2,351,193	-				+2.3
2,351,196	+				+2.3
2,351,196	+				+2.4
2,351,196	+				+2.5
2,351,196	+				+2.3
2,351,196	+				+2.3
2,351,196	+				+1.0
2,351,196	+				+2.1
2,351,196	+				+2.2
2,351,196	+				+2.3
2,351,197	-				+2.3
2,351,197	-				+2.1
2,351,197	-				+2.1
2,351,197	-				+2.1
2,351,197	-				+2.1
2,351,197	-				+2.2
2,351,197	-				+2.3
2,351,197	-				+2.2
2,351,197	-				-0.0
2,351,197	-				+2.3
2,351,237	+				+2.1
2,351,293	+				-0.0
2,351,577	+		Rru_A2036	0.68	+0.5
2,351,577	+		Rru_A2036	0.68	-1.0
2,351,577	+		Rru_A2036	0.68	+1.1
2,351,578	-		Rru_A2036	0.68	-1.6
2,351,578	-		Rru_A2036	0.68	+1.9
2,351,579	+		Rru_A2036	0.69	+3.1
2,351,579	+		Rru_A2036	0.69	-0.2
2,351,945	-				+1.5
2,352,071	-		Rru_A2037	0.11	-0.0
2,352,071	-		Rru_A2037	0.11	+1.0