Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2020

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,332,029	+				-0.0
2,332,030	-				+0.7
2,332,076	+				-0.2
2,332,077	-				-0.0
2,332,077	-				+0.1
2,332,077	-				+1.7
2,332,134	+				+0.3
2,332,135	-				+0.7
2,332,170	+		Rru_A2018	0.12	-0.0
2,332,556	-				+0.4
2,332,613	+				+0.2
2,332,613	+				+0.3
2,333,015	-				+0.7
2,333,021	-				+0.2
2,333,220	-		Rru_A2020	0.73	-0.0
2,333,234	+		Rru_A2020	0.78	-0.0
2,333,235	-		Rru_A2020	0.79	+1.8
2,333,303	+				+0.8
2,333,303	+				-0.3
2,333,305	+				-0.1
2,333,336	+				-0.0
2,333,336	+				-0.0
2,333,759	-				+0.4
2,333,759	-				-0.0
2,333,814	+		Rru_A2021	0.10	+0.1
2,333,814	+		Rru_A2021	0.10	+0.1
2,333,814	+		Rru_A2021	0.10	+0.3
2,333,815	-		Rru_A2021	0.10	+0.6
2,333,815	-		Rru_A2021	0.10	-0.1
2,333,815	-		Rru_A2021	0.10	+0.3
2,334,097	-		Rru_A2021	0.48	-0.0
2,334,126	+		Rru_A2021	0.52	-0.0
2,334,126	+		Rru_A2021	0.52	+2.8
2,334,126	+		Rru_A2021	0.52	-0.4
2,334,126	+		Rru_A2021	0.52	+0.1
2,334,127	-		Rru_A2021	0.52	+0.4
2,334,127	-		Rru_A2021	0.52	-0.0
2,334,127	-		Rru_A2021	0.52	-0.0
2,334,127	-		Rru_A2021	0.52	-0.0
2,334,127	-		Rru_A2021	0.52	+1.1
2,334,219	+		Rru_A2021	0.65	+1.4
2,334,220	-		Rru_A2021	0.65	-0.0
2,334,220	-		Rru_A2021	0.65	-0.4
2,334,220	-		Rru_A2021	0.65	+0.1
2,334,256	+		Rru_A2021	0.70	-1.6
2,334,256	+		Rru_A2021	0.70	-0.0
2,334,256	+		Rru_A2021	0.70	-1.0
2,334,256	+		Rru_A2021	0.70	+0.0
2,334,257	-		Rru_A2021	0.70	+0.2
2,334,262	+		Rru_A2021	0.71	+0.1
2,334,263	-		Rru_A2021	0.71	+0.1
2,334,263	-		Rru_A2021	0.71	+0.5
2,334,263	-		Rru_A2021	0.71	+0.3
2,334,279	+		Rru_A2021	0.73	+0.5
2,334,280	-		Rru_A2021	0.73	+0.5
2,334,280	-		Rru_A2021	0.73	+0.3
2,334,280	-		Rru_A2021	0.73	+0.2