Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2006

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,316,360	-		Rru_A2005	0.18	-0.0
2,316,389	+		Rru_A2005	0.21	+0.6
2,316,479	+		Rru_A2005	0.28	+0.2
2,316,480	-		Rru_A2005	0.28	+1.8
2,316,480	-		Rru_A2005	0.28	+0.6
2,316,480	-		Rru_A2005	0.28	+0.2
2,316,485	+		Rru_A2005	0.29	+0.7
2,316,485	+		Rru_A2005	0.29	+0.6
2,316,486	-		Rru_A2005	0.29	+0.6
2,316,486	-		Rru_A2005	0.29	+1.2
2,316,965	+		Rru_A2005	0.69	-0.0
2,316,965	+		Rru_A2005	0.69	+0.9
2,316,965	+		Rru_A2005	0.69	-0.0
2,316,965	+		Rru_A2005	0.69	+1.2
2,316,966	-		Rru_A2005	0.69	+0.7
2,316,966	-		Rru_A2005	0.69	-0.0
2,316,966	-		Rru_A2005	0.69	-0.0
2,316,967	+		Rru_A2005	0.69	+0.6
2,316,968	-		Rru_A2005	0.69	+0.1
2,317,016	-		Rru_A2005	0.73	+0.1
2,317,255	+				-0.2
2,317,255	+				+1.4
2,317,255	+				+0.6
2,317,256	-				+0.9
2,317,256	-				-0.0
2,317,256	-				-0.0
2,317,256	-				-0.0
2,317,256	-				-0.0
2,317,259	+				+0.1
2,317,259	+				+1.1
2,317,259	+				-0.0
2,317,259	+				+1.3
2,317,260	-				-0.0
2,317,328	+				-0.0
2,317,328	+				+0.8
2,317,328	+				+0.4
2,317,328	+				+0.6
2,317,329	-				+0.4
2,317,538	+		Rru_A2006	0.16	+0.5
2,317,538	+		Rru_A2006	0.16	+1.2
2,317,583	-		Rru_A2006	0.20	+0.6
2,317,676	+		Rru_A2006	0.27	+0.2
2,317,724	+		Rru_A2006	0.31	+0.1
2,317,724	+		Rru_A2006	0.31	-1.8
2,317,724	+		Rru_A2006	0.31	+1.0
2,317,724	+		Rru_A2006	0.31	+0.5
2,317,724	+		Rru_A2006	0.31	+0.0
2,317,724	+		Rru_A2006	0.31	-0.0
2,317,725	-		Rru_A2006	0.31	-0.0
2,317,898	+		Rru_A2006	0.45	+0.4
2,317,899	-		Rru_A2006	0.45	+0.5
2,318,068	+		Rru_A2006	0.59	-0.0
2,318,326	+		Rru_A2006	0.80	+1.1
2,318,327	-		Rru_A2006	0.80	+0.9
2,318,327	-		Rru_A2006	0.80	-0.0
2,318,329	-		Rru_A2006	0.81	-0.0
2,318,436	+		Rru_A2006	0.89	+0.8
2,318,436	+		Rru_A2006	0.89	-0.0
2,318,488	+				+1.0
2,318,488	+				-0.0
2,318,489	-				-0.0
2,318,578	-				-0.3
2,318,619	+				-0.0
2,319,144	+		Rru_A2007	0.45	+0.1
2,319,144	+		Rru_A2007	0.45	+0.6
2,319,144	+		Rru_A2007	0.45	-0.0
2,319,144	+		Rru_A2007	0.45	+1.3
2,319,144	+		Rru_A2007	0.45	-0.0
2,319,144	+		Rru_A2007	0.45	+0.2
2,319,145	-		Rru_A2007	0.45	-0.2
2,319,145	-		Rru_A2007	0.45	+0.2
2,319,145	-		Rru_A2007	0.45	-0.7
2,319,145	-		Rru_A2007	0.45	-0.0
2,319,145	-		Rru_A2007	0.45	+1.0
2,319,558	+		Rru_A2007	0.84	-0.0
2,319,558	+		Rru_A2007	0.84	+0.2
2,319,558	+		Rru_A2007	0.84	+0.7
2,319,558	+		Rru_A2007	0.84	-0.0
2,319,559	-		Rru_A2007	0.85	+0.6
2,319,559	-		Rru_A2007	0.85	-0.0
2,319,559	-		Rru_A2007	0.85	+0.3
2,319,559	-		Rru_A2007	0.85	+0.6