Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1998

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,306,940	+				+0.4
2,307,005	-		Rru_A1997	0.15	-1.0
2,307,005	-		Rru_A1997	0.15	+0.1
2,307,091	+		Rru_A1997	0.24	-0.0
2,307,091	+		Rru_A1997	0.24	-0.1
2,307,092	-		Rru_A1997	0.25	+0.6
2,307,092	-		Rru_A1997	0.25	+1.5
2,307,092	-		Rru_A1997	0.25	-0.0
2,307,092	-		Rru_A1997	0.25	-0.0
2,307,329	-		Rru_A1997	0.51	+0.8
2,307,329	-		Rru_A1997	0.51	-1.6
2,307,349	+		Rru_A1997	0.53	-0.0
2,307,349	+		Rru_A1997	0.53	-1.0
2,307,349	+		Rru_A1997	0.53	+1.7
2,307,350	-		Rru_A1997	0.53	-1.0
2,307,424	+		Rru_A1997	0.62	-0.7
2,307,424	+		Rru_A1997	0.62	+0.7
2,307,425	-		Rru_A1997	0.62	-0.0
2,307,426	+		Rru_A1997	0.62	-0.3
2,307,439	+		Rru_A1997	0.63	+0.3
2,307,440	-		Rru_A1997	0.64	-0.0
2,307,511	-		Rru_A1997	0.71	-0.0
2,307,574	+		Rru_A1997	0.79	+0.3
2,307,575	-		Rru_A1997	0.79	-0.0
2,307,575	-		Rru_A1997	0.79	+0.3
2,307,580	-		Rru_A1997	0.79	-0.2
2,307,580	-		Rru_A1997	0.79	+0.0
2,307,624	+		Rru_A1997	0.84	+0.2
2,307,625	-		Rru_A1997	0.84	+2.0
2,307,625	-		Rru_A1997	0.84	-0.8
2,307,625	-		Rru_A1997	0.84	-0.9
2,307,625	-		Rru_A1997	0.84	+1.9
2,307,625	-		Rru_A1997	0.84	-0.0
2,307,725	+				-0.0
2,307,726	-				-0.0
2,307,726	-				+0.2
2,308,387	+		Rru_A1998	0.46	+1.4
2,308,387	+		Rru_A1998	0.46	+2.0
2,308,506	+		Rru_A1998	0.56	-0.0
2,308,542	+		Rru_A1998	0.59	+0.6
2,308,542	+		Rru_A1998	0.59	-0.0
2,308,542	+		Rru_A1998	0.59	+1.4
2,308,867	+		Rru_A1998	0.88	-0.4
2,308,867	+		Rru_A1998	0.88	-0.0
2,308,867	+		Rru_A1998	0.88	+1.1
2,308,867	+		Rru_A1998	0.88	+0.8
2,308,867	+		Rru_A1998	0.88	+1.8
2,308,867	+		Rru_A1998	0.88	+1.5
2,308,868	-		Rru_A1998	0.88	+0.7
2,308,868	-		Rru_A1998	0.88	-0.0
2,308,997	-				-0.0
2,309,003	+				-0.8
2,309,004	-				-0.0
2,309,100	-		Rru_A1999	0.10	+1.5
2,309,121	+		Rru_A1999	0.17	-0.0
2,309,184	+		Rru_A1999	0.37	-0.5
2,309,367	+				-0.0
2,309,368	-				+0.6
2,309,422	+				-0.9
2,309,721	+				-0.0
2,309,721	+				-1.6
2,309,721	+				-0.0
2,309,721	+				-0.4
2,309,722	-				-0.0
2,309,722	-				-0.0
2,309,723	+				-1.0
2,309,723	+				-1.0
2,309,723	+				-0.0
2,309,724	-				+0.1
2,309,761	+				-1.5
2,309,761	+				-0.7
2,309,762	-				-0.0
2,309,799	+				-0.5
2,309,801	+				-0.7
2,309,801	+				-1.4