Strain Fitness in Rhodospirillum rubrum S1H around Rru_AR0037

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,304,934	-		Rru_A1995	0.37	+0.4
2,305,067	+		Rru_A1995	0.46	-1.0
2,305,068	-		Rru_A1995	0.46	-0.0
2,305,068	-		Rru_A1995	0.46	-1.0
2,305,233	+		Rru_A1995	0.58	+0.6
2,305,233	+		Rru_A1995	0.58	-0.0
2,305,233	+		Rru_A1995	0.58	+0.5
2,305,233	+		Rru_A1995	0.58	+1.2
2,305,233	+		Rru_A1995	0.58	+1.2
2,305,233	+		Rru_A1995	0.58	+0.7
2,305,233	+		Rru_A1995	0.58	+0.2
2,305,234	-		Rru_A1995	0.58	-0.0
2,305,234	-		Rru_A1995	0.58	-0.2
2,305,234	-		Rru_A1995	0.58	-0.2
2,305,234	-		Rru_A1995	0.58	+0.0
2,305,234	-		Rru_A1995	0.58	-1.0
2,305,234	-		Rru_A1995	0.58	-0.3
2,305,234	-		Rru_A1995	0.58	+0.6
2,305,234	-		Rru_A1995	0.58	-0.5
2,305,234	-		Rru_A1995	0.58	+0.8
2,305,278	+		Rru_A1995	0.61	+0.8
2,305,278	+		Rru_A1995	0.61	+0.6
2,305,279	-		Rru_A1995	0.61	-0.0
2,305,279	-		Rru_A1995	0.61	-0.4
2,305,305	+		Rru_A1995	0.63	-0.0
2,305,305	+		Rru_A1995	0.63	+0.8
2,305,305	+		Rru_A1995	0.63	-0.3
2,305,455	+		Rru_A1995	0.73	-0.0
2,305,455	+		Rru_A1995	0.73	-1.0
2,305,455	+		Rru_A1995	0.73	-0.0
2,305,455	+		Rru_A1995	0.73	+0.5
2,305,455	+		Rru_A1995	0.73	+2.4
2,305,455	+		Rru_A1995	0.73	-0.0
2,305,456	-		Rru_A1995	0.74	-1.6
2,305,456	-		Rru_A1995	0.74	-0.0
2,305,456	-		Rru_A1995	0.74	-0.0
2,305,456	-		Rru_A1995	0.74	-0.0
2,305,506	+		Rru_A1995	0.77	+0.9
2,305,507	-		Rru_A1995	0.77	-0.1
2,305,539	+		Rru_A1995	0.79	+0.5
2,305,539	+		Rru_A1995	0.79	+0.9
2,305,539	+		Rru_A1995	0.79	+0.4
2,305,539	+		Rru_A1995	0.79	-0.0
2,305,539	+		Rru_A1995	0.79	+0.6
2,305,539	+		Rru_A1995	0.79	+1.3
2,305,540	-		Rru_A1995	0.79	-0.0
2,305,540	-		Rru_A1995	0.79	-0.6
2,305,540	-		Rru_A1995	0.79	-0.4
2,305,651	-		Rru_A1995	0.87	+1.1
2,305,853	+				+0.5
2,305,854	-				-0.0
2,305,921	+				-0.6
2,306,031	-				-0.0
2,306,855	+				-0.0
2,306,855	+				+0.2
2,306,856	-				+0.7
2,306,856	-				-0.2
2,306,856	-				-0.0
2,306,856	-				-0.1
2,306,856	-				-1.0
2,306,856	-				-0.1
2,306,861	+				+0.1
2,306,862	-				-0.0
2,306,862	-				-0.0
2,306,862	-				-0.2
2,306,864	+				-0.0
2,306,864	+				-0.0
2,306,864	+				+0.4
2,306,864	+				+0.3
2,306,864	+				-0.3
2,306,865	-				+0.8
2,306,865	-				+1.0
2,306,866	+				+0.2
2,306,866	+				+1.2
2,306,866	+				+0.2
2,306,866	+				+0.6
2,306,866	+				-0.0
2,306,866	+				+1.2
2,306,867	-				+1.1
2,306,867	-				-0.0
2,306,867	-				+0.3
2,306,867	-				-0.7
2,306,940	+				+0.4
2,307,005	-		Rru_A1997	0.15	-1.0
2,307,005	-		Rru_A1997	0.15	+0.1