Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1991

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,301,240	+		Rru_A1989	0.86	-0.0
2,301,241	-		Rru_A1989	0.86	+0.6
2,301,244	+		Rru_A1989	0.87	+1.5
2,301,245	-		Rru_A1989	0.87	-0.0
2,301,245	-		Rru_A1989	0.87	+0.5
2,301,245	-		Rru_A1989	0.87	+0.0
2,301,246	+		Rru_A1989	0.87	-0.0
2,301,246	+		Rru_A1989	0.87	-0.0
2,301,246	+		Rru_A1989	0.87	+2.8
2,301,246	+		Rru_A1989	0.87	-0.0
2,301,247	-		Rru_A1989	0.87	-1.0
2,301,247	-		Rru_A1989	0.87	-4.1
2,301,331	+				-0.0
2,301,332	-				-0.3
2,301,602	+				-0.6
2,301,695	-				-0.0
2,301,695	-				-0.0
2,301,781	+		Rru_A1990	0.25	+0.7
2,301,781	+		Rru_A1990	0.25	+0.9
2,301,781	+		Rru_A1990	0.25	+1.1
2,301,781	+		Rru_A1990	0.25	-0.0
2,301,782	-		Rru_A1990	0.25	+0.3
2,301,782	-		Rru_A1990	0.25	-0.0
2,301,782	-		Rru_A1990	0.25	+0.4
2,301,894	-		Rru_A1990	0.53	+0.4
2,301,894	-		Rru_A1990	0.53	-0.5
2,301,985	+		Rru_A1990	0.75	+0.5
2,301,986	-		Rru_A1990	0.75	-0.0
2,301,986	-		Rru_A1990	0.75	+0.8
2,302,336	+		Rru_A1991	0.28	+1.0
2,302,336	+		Rru_A1991	0.28	+0.5
2,302,336	+		Rru_A1991	0.28	+0.0
2,302,336	+		Rru_A1991	0.28	-0.0
2,302,337	-		Rru_A1991	0.28	+0.8
2,302,337	-		Rru_A1991	0.28	-0.0
2,302,337	-		Rru_A1991	0.28	-0.0
2,302,337	-		Rru_A1991	0.28	-0.0
2,302,337	-		Rru_A1991	0.28	+1.2
2,302,482	+		Rru_A1991	0.46	+0.3
2,303,414	+				+1.2
2,303,414	+				-0.0
2,303,415	-				-0.0
2,303,415	-				+0.7
2,303,419	+				+0.3
2,303,419	+				+0.6
2,303,420	-				-1.0
2,303,420	-				-2.9
2,303,420	-				+0.2
2,303,420	-				+0.7