Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1986

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,295,090	+		Rru_A1984	0.49	-0.2
2,295,090	+		Rru_A1984	0.49	+0.1
2,295,091	-		Rru_A1984	0.49	-0.0
2,295,091	-		Rru_A1984	0.49	+0.2
2,295,372	-		Rru_A1985	0.24	-0.2
2,295,372	-		Rru_A1985	0.24	-0.2
2,295,413	+		Rru_A1985	0.33	-0.4
2,295,413	+		Rru_A1985	0.33	-0.0
2,295,414	-		Rru_A1985	0.34	-0.4
2,295,414	-		Rru_A1985	0.34	+0.4
2,295,414	-		Rru_A1985	0.34	+0.1
2,295,415	+		Rru_A1985	0.34	-0.0
2,295,415	+		Rru_A1985	0.34	-1.0
2,295,416	-		Rru_A1985	0.34	-1.4
2,295,416	-		Rru_A1985	0.34	+0.2
2,295,416	-		Rru_A1985	0.34	-0.0
2,295,781	-				+0.2
2,295,807	-				+0.4
2,295,832	+				-0.0
2,295,832	+				-0.0
2,295,832	+				-0.0
2,295,832	+				+0.3
2,295,832	+				-0.3
2,295,833	-				+0.2
2,295,833	-				+0.2
2,295,833	-				-0.0
2,295,952	+		Rru_A1986	0.17	+0.1
2,295,952	+		Rru_A1986	0.17	-0.0
2,296,018	-		Rru_A1986	0.26	+0.8
2,296,018	-		Rru_A1986	0.26	-0.0
2,296,018	-		Rru_A1986	0.26	-0.0
2,296,018	-		Rru_A1986	0.26	-0.2
2,296,021	+		Rru_A1986	0.26	-0.3
2,296,021	+		Rru_A1986	0.26	-1.6
2,296,047	-		Rru_A1986	0.30	-0.0
2,296,047	-		Rru_A1986	0.30	-1.6
2,296,047	-		Rru_A1986	0.30	-0.3
2,296,047	-		Rru_A1986	0.30	-0.0
2,296,047	-		Rru_A1986	0.30	+0.6
2,296,108	+		Rru_A1986	0.38	-0.0
2,296,109	-		Rru_A1986	0.39	-1.2
2,296,190	+		Rru_A1986	0.50	+0.4
2,296,191	-		Rru_A1986	0.50	-0.0
2,296,191	-		Rru_A1986	0.50	-0.0
2,296,211	-		Rru_A1986	0.53	-0.0
2,296,211	-		Rru_A1986	0.53	-1.0
2,296,286	+		Rru_A1986	0.63	-0.2
2,296,286	+		Rru_A1986	0.63	+0.3
2,296,286	+		Rru_A1986	0.63	-0.8
2,296,287	-		Rru_A1986	0.63	-0.4
2,296,287	-		Rru_A1986	0.63	-0.0
2,296,287	-		Rru_A1986	0.63	+0.4
2,296,287	-		Rru_A1986	0.63	-0.0
2,296,292	-		Rru_A1986	0.64	-0.0
2,296,306	+		Rru_A1986	0.66	+0.5
2,296,372	+		Rru_A1986	0.75	+0.4
2,296,372	+		Rru_A1986	0.75	-0.0
2,296,372	+		Rru_A1986	0.75	+0.3
2,296,372	+		Rru_A1986	0.75	+0.4
2,296,372	+		Rru_A1986	0.75	-0.0
2,296,373	-		Rru_A1986	0.75	-0.0
2,296,373	-		Rru_A1986	0.75	-2.0
2,296,373	-		Rru_A1986	0.75	+0.2
2,296,373	-		Rru_A1986	0.75	+0.9
2,296,373	-		Rru_A1986	0.75	-0.0
2,296,373	-		Rru_A1986	0.75	-0.0
2,296,403	+		Rru_A1986	0.79	+1.7
2,296,403	+		Rru_A1986	0.79	+1.5
2,296,403	+		Rru_A1986	0.79	-0.0
2,296,403	+		Rru_A1986	0.79	-0.0
2,296,403	+		Rru_A1986	0.79	+1.2
2,296,403	+		Rru_A1986	0.79	-0.0
2,296,404	-		Rru_A1986	0.80	-0.3
2,296,404	-		Rru_A1986	0.80	+0.4
2,296,404	-		Rru_A1986	0.80	-0.5
2,296,404	-		Rru_A1986	0.80	-0.0
2,296,405	+		Rru_A1986	0.80	-0.0
2,296,405	+		Rru_A1986	0.80	+0.4
2,296,405	+		Rru_A1986	0.80	-0.1
2,296,405	+		Rru_A1986	0.80	+1.0
2,296,406	-		Rru_A1986	0.80	-0.0
2,296,460	+		Rru_A1986	0.87	-0.9
2,296,460	+		Rru_A1986	0.87	-0.0
2,296,461	-		Rru_A1986	0.88	-1.0
2,296,461	-		Rru_A1986	0.88	-0.3
2,296,511	-				+0.3
2,296,551	-				-0.0
2,296,615	-				-0.1
2,296,673	+				-0.0
2,296,673	+				+1.0
2,296,673	+				+0.0
2,296,673	+				+0.2
2,296,674	-				-0.0
2,296,674	-				+0.2
2,296,795	+				+0.2
2,296,796	-				-0.1
2,296,938	+		Rru_A1987	0.15	-0.2
2,296,939	-		Rru_A1987	0.15	+0.8
2,296,939	-		Rru_A1987	0.15	-0.4
2,296,939	-		Rru_A1987	0.15	+1.4
2,296,952	+		Rru_A1987	0.16	-1.0
2,297,039	+		Rru_A1987	0.24	-0.0
2,297,040	-		Rru_A1987	0.24	-1.6
2,297,042	+		Rru_A1987	0.24	-0.0
2,297,115	-		Rru_A1987	0.30	-0.2
2,297,382	+		Rru_A1987	0.53	+0.1
2,297,382	+		Rru_A1987	0.53	-0.0
2,297,383	-		Rru_A1987	0.53	-0.0
2,297,383	-		Rru_A1987	0.53	-0.0
2,297,383	-		Rru_A1987	0.53	+0.5
2,297,383	-		Rru_A1987	0.53	-0.0
2,297,384	+		Rru_A1987	0.53	+0.3
2,297,385	-		Rru_A1987	0.53	+0.7
2,297,395	+		Rru_A1987	0.54	-0.0
2,297,469	+		Rru_A1987	0.60	+0.4
2,297,469	+		Rru_A1987	0.60	-0.0
2,297,469	+		Rru_A1987	0.60	-0.2
2,297,470	-		Rru_A1987	0.61	+2.3
2,297,470	-		Rru_A1987	0.61	-0.2