Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1976

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,285,155	+		Rru_A1974	0.75	-0.0
2,285,156	-		Rru_A1974	0.75	-0.5
2,285,182	+		Rru_A1974	0.77	-0.3
2,285,183	-		Rru_A1974	0.78	-0.0
2,285,183	-		Rru_A1974	0.78	+0.5
2,285,183	-		Rru_A1974	0.78	-0.0
2,285,316	+		Rru_A1974	0.88	+0.3
2,285,316	+		Rru_A1974	0.88	-0.0
2,285,317	-		Rru_A1974	0.88	+0.3
2,285,317	-		Rru_A1974	0.88	+0.3
2,285,317	-		Rru_A1974	0.88	+0.1
2,285,356	+				-0.0
2,285,357	-				-0.0
2,285,931	+				-0.0
2,286,032	+				+0.4
2,286,032	+				-0.0
2,286,035	+				+1.8
2,286,035	+				-2.2
2,286,035	+				-1.0
2,286,036	-				+0.2
2,286,036	-				-0.0
2,286,142	-				+1.5
2,286,142	-				-0.0
2,286,173	+		Rru_A1976	0.11	+0.5
2,286,173	+		Rru_A1976	0.11	+0.2
2,286,257	+		Rru_A1976	0.17	-0.6
2,286,311	+		Rru_A1976	0.21	-0.0
2,286,311	+		Rru_A1976	0.21	+1.0
2,286,312	-		Rru_A1976	0.21	+1.0
2,286,312	-		Rru_A1976	0.21	+0.3
2,286,312	-		Rru_A1976	0.21	+0.1
2,286,616	+		Rru_A1976	0.45	+1.0
2,286,623	+		Rru_A1976	0.45	-0.0
2,286,623	+		Rru_A1976	0.45	+0.8
2,286,624	-		Rru_A1976	0.45	+0.4
2,286,642	+		Rru_A1976	0.46	-0.0
2,286,774	-		Rru_A1976	0.57	-0.0
2,286,888	-		Rru_A1976	0.65	-0.0
2,286,942	+		Rru_A1976	0.69	+1.6
2,286,943	-		Rru_A1976	0.69	-0.0
2,286,943	-		Rru_A1976	0.69	-0.0
2,287,018	-		Rru_A1976	0.75	+0.3
2,287,018	-		Rru_A1976	0.75	+0.3
2,287,019	+		Rru_A1976	0.75	-0.0
2,287,020	-		Rru_A1976	0.75	-0.0
2,287,320	+				-0.0
2,287,320	+				-0.0
2,287,320	+				+0.8
2,287,320	+				-0.0
2,287,320	+				-0.0
2,287,320	+				+0.7
2,287,320	+				-0.0
2,287,320	+				-0.0
2,287,321	-				-0.0
2,287,321	-				+0.2
2,287,321	-				+0.0
2,287,321	-				+0.3
2,287,321	-				-0.0
2,287,321	-				-0.0
2,287,321	-				+1.0
2,287,322	+				+0.2
2,287,323	-				+0.7
2,287,338	+				-0.0
2,287,338	+				+0.6
2,287,338	+				+1.1
2,287,339	-				+0.9
2,287,339	-				+0.4
2,287,339	-				+0.5
2,287,339	-				-0.6
2,287,339	-				+0.7
2,288,001	+				+1.0
2,288,001	+				-0.0
2,288,002	-				+0.8
2,288,002	-				-0.0
2,288,002	-				-0.0
2,288,232	+		Rru_A1978	0.11	-0.8