Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1970

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,276,675	+		Rru_A1969	0.27	-0.4
2,276,969	+		Rru_A1969	0.53	-0.0
2,276,970	-		Rru_A1969	0.54	+0.9
2,276,970	-		Rru_A1969	0.54	-0.3
2,277,023	+		Rru_A1969	0.58	+0.9
2,277,489	-				+0.7
2,277,564	+				-0.0
2,277,564	+				-0.2
2,277,564	+				-0.0
2,277,565	-				+0.5
2,277,565	-				-1.0
2,277,567	-				+0.4
2,277,882	+		Rru_A1970	0.23	+1.0
2,277,883	-		Rru_A1970	0.23	-0.0
2,277,883	-		Rru_A1970	0.23	-0.0
2,277,884	+		Rru_A1970	0.23	-0.0
2,277,884	+		Rru_A1970	0.23	-0.0
2,277,884	+		Rru_A1970	0.23	-0.1
2,277,885	-		Rru_A1970	0.23	-0.0
2,277,920	+		Rru_A1970	0.25	-0.0
2,277,921	-		Rru_A1970	0.25	-0.0
2,277,921	-		Rru_A1970	0.25	+0.3
2,277,930	+		Rru_A1970	0.26	-0.7
2,277,931	-		Rru_A1970	0.26	-0.0
2,278,067	+		Rru_A1970	0.34	-1.0
2,278,067	+		Rru_A1970	0.34	+1.4
2,278,067	+		Rru_A1970	0.34	+0.5
2,278,067	+		Rru_A1970	0.34	-1.0
2,278,067	+		Rru_A1970	0.34	-1.0
2,278,067	+		Rru_A1970	0.34	-0.0
2,278,067	+		Rru_A1970	0.34	+1.5
2,278,067	+		Rru_A1970	0.34	+0.5
2,278,068	-		Rru_A1970	0.34	-0.0
2,278,068	-		Rru_A1970	0.34	+0.4
2,278,068	-		Rru_A1970	0.34	-0.0
2,278,068	-		Rru_A1970	0.34	-1.0
2,278,068	-		Rru_A1970	0.34	+1.1
2,278,068	-		Rru_A1970	0.34	-1.0
2,278,068	-		Rru_A1970	0.34	-0.2
2,278,068	-		Rru_A1970	0.34	-0.0
2,278,068	-		Rru_A1970	0.34	+0.2
2,278,068	-		Rru_A1970	0.34	+1.0
2,278,068	-		Rru_A1970	0.34	-0.0
2,278,068	-		Rru_A1970	0.34	-1.6
2,278,068	-		Rru_A1970	0.34	-0.0
2,278,068	-		Rru_A1970	0.34	+0.6
2,278,068	-		Rru_A1970	0.34	-0.0
2,278,068	-		Rru_A1970	0.34	-0.0
2,278,181	+		Rru_A1970	0.40	+0.2
2,278,182	-		Rru_A1970	0.40	+0.5
2,278,182	-		Rru_A1970	0.40	-0.0
2,278,301	+		Rru_A1970	0.47	-0.0
2,278,302	-		Rru_A1970	0.47	-0.6
2,278,302	-		Rru_A1970	0.47	+0.0
2,278,364	+		Rru_A1970	0.51	-0.0
2,278,491	+		Rru_A1970	0.58	-0.0
2,278,491	+		Rru_A1970	0.58	-0.0
2,278,491	+		Rru_A1970	0.58	+0.1
2,278,492	-		Rru_A1970	0.58	-1.0
2,278,492	-		Rru_A1970	0.58	+0.6
2,278,492	-		Rru_A1970	0.58	-0.0
2,278,493	+		Rru_A1970	0.58	+0.0
2,278,493	+		Rru_A1970	0.58	-0.4
2,278,493	+		Rru_A1970	0.58	+0.5
2,278,493	+		Rru_A1970	0.58	+0.9
2,278,494	-		Rru_A1970	0.58	-0.0
2,278,494	-		Rru_A1970	0.58	+0.2
2,278,732	+		Rru_A1970	0.72	-0.0
2,278,732	+		Rru_A1970	0.72	-0.9
2,278,733	-		Rru_A1970	0.72	-1.0
2,278,733	-		Rru_A1970	0.72	+0.3
2,278,733	-		Rru_A1970	0.72	+0.0
2,278,830	+		Rru_A1970	0.78	-0.0
2,278,830	+		Rru_A1970	0.78	+0.7
2,278,831	-		Rru_A1970	0.78	-0.5
2,279,217	+				-0.0
2,279,217	+				-0.0
2,279,217	+				-0.0
2,279,217	+				-0.0
2,279,217	+				+1.5
2,279,217	+				+1.0
2,279,218	-				-0.1
2,279,259	+				-0.0
2,279,763	+		Rru_A1971	0.51	-0.0
2,279,763	+		Rru_A1971	0.51	-0.0
2,279,763	+		Rru_A1971	0.51	-0.0
2,279,763	+		Rru_A1971	0.51	-1.0
2,279,763	+		Rru_A1971	0.51	-1.0
2,279,763	+		Rru_A1971	0.51	-0.3
2,279,764	-		Rru_A1971	0.51	-0.0
2,279,764	-		Rru_A1971	0.51	-0.0
2,279,764	-		Rru_A1971	0.51	-0.0
2,279,837	+		Rru_A1971	0.59	-0.0
2,279,837	+		Rru_A1971	0.59	-0.0
2,279,838	-		Rru_A1971	0.59	-0.0
2,279,897	-		Rru_A1971	0.65	-0.0
2,280,019	+		Rru_A1971	0.77	-0.0
2,280,020	-		Rru_A1971	0.77	-2.4
2,280,020	-		Rru_A1971	0.77	+0.8
2,280,039	+		Rru_A1971	0.79	-0.0