Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1964

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,270,425	+		Rru_A1963	0.26	-0.0
2,270,425	+		Rru_A1963	0.26	-0.0
2,270,426	-		Rru_A1963	0.26	-0.0
2,270,484	-		Rru_A1963	0.31	-0.0
2,270,830	+		Rru_A1963	0.57	+0.3
2,270,830	+		Rru_A1963	0.57	-0.0
2,270,830	+		Rru_A1963	0.57	-0.7
2,270,830	+		Rru_A1963	0.57	+0.4
2,270,830	+		Rru_A1963	0.57	+1.1
2,270,831	-		Rru_A1963	0.57	+0.1
2,270,831	-		Rru_A1963	0.57	-0.0
2,270,831	-		Rru_A1963	0.57	-1.0
2,270,831	-		Rru_A1963	0.57	-0.0
2,270,831	-		Rru_A1963	0.57	-0.0
2,270,859	+		Rru_A1963	0.59	-0.0
2,270,860	-		Rru_A1963	0.60	+0.4
2,270,860	-		Rru_A1963	0.60	+0.4
2,271,072	+		Rru_A1963	0.76	-1.0
2,271,092	+		Rru_A1963	0.77	+0.6
2,271,130	+		Rru_A1963	0.80	+0.1
2,271,162	-		Rru_A1963	0.83	-0.0
2,271,419	-				+1.0
2,271,754	+		Rru_A1964	0.37	+0.1
2,271,755	-		Rru_A1964	0.37	+0.7
2,271,755	-		Rru_A1964	0.37	-0.3
2,271,755	-		Rru_A1964	0.37	+1.6
2,271,831	+		Rru_A1964	0.44	+0.1
2,271,831	+		Rru_A1964	0.44	+2.0
2,271,831	+		Rru_A1964	0.44	-0.2
2,271,831	+		Rru_A1964	0.44	+1.0
2,271,832	-		Rru_A1964	0.44	-0.0
2,271,936	+		Rru_A1964	0.55	+1.1
2,271,937	-		Rru_A1964	0.55	-0.0
2,271,937	-		Rru_A1964	0.55	+1.7
2,271,937	-		Rru_A1964	0.55	+0.5
2,272,261	+		Rru_A1964	0.87	-0.6
2,272,261	+		Rru_A1964	0.87	+1.0
2,272,327	-				-0.0
2,272,469	-				-0.2
2,272,575	+				-0.0
2,272,575	+				-0.0
2,272,575	+				-0.0
2,272,575	+				+0.3
2,272,575	+				-0.0
2,272,576	-				-0.3
2,272,805	-				+1.2
2,272,805	-				-0.0
2,273,095	+		Rru_A1966	0.14	+0.5
2,273,095	+		Rru_A1966	0.14	-0.0
2,273,096	-		Rru_A1966	0.14	+0.6
2,273,113	+		Rru_A1966	0.15	+0.1
2,273,113	+		Rru_A1966	0.15	+0.9
2,273,248	-		Rru_A1966	0.24	-0.0
2,273,281	+		Rru_A1966	0.26	-0.0
2,273,282	-		Rru_A1966	0.26	+1.0
2,273,283	+		Rru_A1966	0.26	+0.0
2,273,283	+		Rru_A1966	0.26	+0.7
2,273,283	+		Rru_A1966	0.26	-0.0
2,273,284	-		Rru_A1966	0.26	-0.0
2,273,284	-		Rru_A1966	0.26	+0.7
2,273,284	-		Rru_A1966	0.26	+1.4
2,273,284	-		Rru_A1966	0.26	+1.1
2,273,318	-		Rru_A1966	0.29	+0.4
2,273,318	-		Rru_A1966	0.29	+0.7
2,273,392	+		Rru_A1966	0.34	+0.7
2,273,393	-		Rru_A1966	0.34	-0.7
2,273,393	-		Rru_A1966	0.34	+0.5