Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1962

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,268,824	-		Rru_A1960	0.76	-0.5
2,268,824	-		Rru_A1960	0.76	-0.4
2,268,835	+		Rru_A1960	0.78	+0.3
2,268,836	-		Rru_A1960	0.78	+0.1
2,268,974	+				+0.2
2,268,975	-				-1.1
2,269,101	+				-0.4
2,269,253	-		Rru_A1961	0.28	-0.1
2,269,258	+		Rru_A1961	0.29	-0.3
2,269,258	+		Rru_A1961	0.29	+0.5
2,269,258	+		Rru_A1961	0.29	-0.9
2,269,258	+		Rru_A1961	0.29	-0.7
2,269,259	-		Rru_A1961	0.29	-0.0
2,269,259	-		Rru_A1961	0.29	-0.0
2,269,267	-		Rru_A1961	0.30	+0.3
2,269,377	+		Rru_A1961	0.47	-0.1
2,269,457	-		Rru_A1961	0.60	+1.2
2,269,648	+		Rru_A1961	0.89	-2.4
2,269,681	+				-0.0
2,269,682	-				+0.1
2,269,756	-				+0.2
2,269,756	-				+0.3
2,269,756	-				+0.8
2,269,756	-				+0.6
2,269,757	+				+1.0
2,269,764	+				-0.0
2,269,765	-				-0.0
2,269,921	-		Rru_A1962	0.49	-0.2
2,269,921	-		Rru_A1962	0.49	-0.0
2,269,921	-		Rru_A1962	0.49	-0.0
2,269,939	-		Rru_A1962	0.55	+0.3
2,269,939	-		Rru_A1962	0.55	+1.1
2,269,988	+		Rru_A1962	0.71	+1.4
2,270,037	-		Rru_A1962	0.88	-0.0
2,270,086	+				+0.5
2,270,425	+		Rru_A1963	0.26	-0.0
2,270,425	+		Rru_A1963	0.26	-0.0
2,270,426	-		Rru_A1963	0.26	-0.0
2,270,484	-		Rru_A1963	0.31	-0.0
2,270,830	+		Rru_A1963	0.57	+0.3
2,270,830	+		Rru_A1963	0.57	-0.0
2,270,830	+		Rru_A1963	0.57	-0.7
2,270,830	+		Rru_A1963	0.57	+0.4
2,270,830	+		Rru_A1963	0.57	+1.1
2,270,831	-		Rru_A1963	0.57	+0.1
2,270,831	-		Rru_A1963	0.57	-0.0
2,270,831	-		Rru_A1963	0.57	-1.0
2,270,831	-		Rru_A1963	0.57	-0.0
2,270,831	-		Rru_A1963	0.57	-0.0
2,270,859	+		Rru_A1963	0.59	-0.0
2,270,860	-		Rru_A1963	0.60	+0.4
2,270,860	-		Rru_A1963	0.60	+0.4
2,271,072	+		Rru_A1963	0.76	-1.0