Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1958

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,265,515	-		Rru_A1956	0.86	+0.4
2,265,608	+				-0.9
2,265,608	+				-1.0
2,265,609	-				+0.7
2,265,609	-				+0.6
2,265,755	+		Rru_A1957	0.15	+0.1
2,265,755	+		Rru_A1957	0.15	+1.0
2,265,755	+		Rru_A1957	0.15	+0.0
2,265,756	-		Rru_A1957	0.15	+0.9
2,265,948	+		Rru_A1957	0.42	+0.1
2,265,948	+		Rru_A1957	0.42	-0.0
2,265,948	+		Rru_A1957	0.42	+1.1
2,265,949	-		Rru_A1957	0.42	-0.0
2,265,949	-		Rru_A1957	0.42	+1.0
2,265,949	-		Rru_A1957	0.42	-1.6
2,265,949	-		Rru_A1957	0.42	-0.0
2,265,949	-		Rru_A1957	0.42	-0.4
2,265,949	-		Rru_A1957	0.42	+0.9
2,265,949	-		Rru_A1957	0.42	+0.8
2,265,949	-		Rru_A1957	0.42	-0.0
2,265,949	-		Rru_A1957	0.42	-0.0
2,265,949	-		Rru_A1957	0.42	-0.0
2,265,949	-		Rru_A1957	0.42	-0.0
2,265,949	-		Rru_A1957	0.42	+0.1
2,265,949	-		Rru_A1957	0.42	-1.6
2,265,949	-		Rru_A1957	0.42	-0.0
2,265,949	-		Rru_A1957	0.42	+0.6
2,266,077	+		Rru_A1957	0.60	+1.7
2,266,077	+		Rru_A1957	0.60	-0.3
2,266,077	+		Rru_A1957	0.60	-0.0
2,266,077	+		Rru_A1957	0.60	+0.5
2,266,078	-		Rru_A1957	0.60	+1.5
2,266,078	-		Rru_A1957	0.60	+0.1
2,266,078	-		Rru_A1957	0.60	-1.0
2,266,078	-		Rru_A1957	0.60	-0.0
2,266,078	-		Rru_A1957	0.60	+0.4
2,266,079	+		Rru_A1957	0.60	+0.1
2,266,079	+		Rru_A1957	0.60	-0.0
2,266,079	+		Rru_A1957	0.60	-0.0
2,266,079	+		Rru_A1957	0.60	-1.5
2,266,079	+		Rru_A1957	0.60	+0.3
2,266,079	+		Rru_A1957	0.60	+1.2
2,266,080	-		Rru_A1957	0.60	+0.1
2,266,080	-		Rru_A1957	0.60	+0.2
2,266,218	+		Rru_A1957	0.79	-0.0
2,266,239	+		Rru_A1957	0.82	-0.3
2,266,240	-		Rru_A1957	0.82	+0.1
2,266,240	-		Rru_A1957	0.82	-0.0
2,266,240	-		Rru_A1957	0.82	-0.0
2,266,338	+				+0.2
2,266,339	-				+0.4
2,266,339	-				-1.6
2,266,339	-				-0.0
2,266,339	-				-0.5
2,266,339	-				-0.2
2,266,812	-		Rru_A1958	0.38	-0.0
2,266,812	-		Rru_A1958	0.38	+0.9
2,267,282	+		Rru_A1958	0.78	+0.4
2,267,282	+		Rru_A1958	0.78	-0.0
2,267,283	-		Rru_A1958	0.78	-0.0
2,267,283	-		Rru_A1958	0.78	-0.0
2,267,362	-		Rru_A1958	0.85	-1.0
2,267,378	+		Rru_A1958	0.87	-0.0
2,267,378	+		Rru_A1958	0.87	-0.0
2,267,379	-		Rru_A1958	0.87	-0.0
2,267,379	-		Rru_A1958	0.87	+0.8
2,267,379	-		Rru_A1958	0.87	+0.7
2,267,609	-		Rru_A1959	0.10	+0.8
2,267,888	+		Rru_A1959	0.50	+0.1
2,267,989	+		Rru_A1959	0.64	-0.0
2,267,989	+		Rru_A1959	0.64	+1.0
2,267,989	+		Rru_A1959	0.64	+1.4
2,267,989	+		Rru_A1959	0.64	+0.6
2,267,989	+		Rru_A1959	0.64	-0.0
2,267,989	+		Rru_A1959	0.64	+0.4
2,267,990	-		Rru_A1959	0.64	+0.1
2,267,990	-		Rru_A1959	0.64	-0.0
2,268,206	+				+0.5
2,268,206	+				-0.0
2,268,207	-				+1.0
2,268,241	+				+1.6
2,268,241	+				+0.2
2,268,242	-				+1.1
2,268,242	-				-0.0
2,268,306	+				+0.3
2,268,307	-				-0.0
2,268,367	+				+1.2
2,268,367	+				-0.0
2,268,367	+				+0.9
2,268,368	-				+0.7
2,268,368	-				-2.0
2,268,368	-				-0.0
2,268,368	-				-0.0
2,268,368	-				-0.0
2,268,368	-				-0.0
2,268,400	+		Rru_A1960	0.13	+0.5
2,268,400	+		Rru_A1960	0.13	+0.1
2,268,400	+		Rru_A1960	0.13	+1.1
2,268,400	+		Rru_A1960	0.13	-0.3
2,268,400	+		Rru_A1960	0.13	-0.4
2,268,401	-		Rru_A1960	0.13	+0.2
2,268,401	-		Rru_A1960	0.13	-0.0
2,268,401	-		Rru_A1960	0.13	+0.1
2,268,401	-		Rru_A1960	0.13	+0.8
2,268,484	+		Rru_A1960	0.25	-1.0