Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1954

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,262,297	+		Rru_A1952	0.63	-0.1
2,262,297	+		Rru_A1952	0.63	+0.1
2,262,297	+		Rru_A1952	0.63	-0.1
2,262,297	+		Rru_A1952	0.63	+0.0
2,262,297	+		Rru_A1952	0.63	-0.1
2,262,297	+		Rru_A1952	0.63	-0.2
2,262,297	+		Rru_A1952	0.63	-0.4
2,262,298	-		Rru_A1952	0.63	+0.2
2,262,298	-		Rru_A1952	0.63	-0.1
2,262,298	-		Rru_A1952	0.63	+0.3
2,262,298	-		Rru_A1952	0.63	-1.1
2,262,298	-		Rru_A1952	0.63	+0.6
2,262,298	-		Rru_A1952	0.63	+0.2
2,262,299	+		Rru_A1952	0.63	-0.1
2,262,299	+		Rru_A1952	0.63	-0.1
2,262,299	+		Rru_A1952	0.63	+0.6
2,262,300	-		Rru_A1952	0.63	-0.6
2,262,300	-		Rru_A1952	0.63	+0.9
2,262,315	+		Rru_A1952	0.64	-0.1
2,262,316	-		Rru_A1952	0.64	-0.1
2,262,316	-		Rru_A1952	0.64	-0.1
2,262,339	+		Rru_A1952	0.65	-0.1
2,262,339	+		Rru_A1952	0.65	-0.1
2,262,598	+		Rru_A1952	0.77	-0.1
2,262,599	-		Rru_A1952	0.77	-0.1
2,262,599	-		Rru_A1952	0.77	-0.1
2,262,635	-		Rru_A1952	0.79	-0.1
2,263,043	+				-0.1
2,263,044	-				+0.1
2,263,044	-				+1.2
2,263,044	-				-1.6
2,263,044	-				+0.9
2,263,186	+		Rru_A1953	0.54	+0.6
2,263,241	+		Rru_A1953	0.80	+1.1
2,263,241	+		Rru_A1953	0.80	-0.1
2,263,241	+		Rru_A1953	0.80	+0.9
2,263,242	-		Rru_A1953	0.80	+0.3
2,263,242	-		Rru_A1953	0.80	-0.1
2,263,315	+				-1.1
2,263,479	+		Rru_A1954	0.22	-0.2
2,263,486	+		Rru_A1954	0.23	+1.1
2,263,486	+		Rru_A1954	0.23	-0.3
2,263,486	+		Rru_A1954	0.23	-0.2
2,263,486	+		Rru_A1954	0.23	+0.7
2,263,486	+		Rru_A1954	0.23	+0.3
2,263,486	+		Rru_A1954	0.23	-0.1
2,263,487	-		Rru_A1954	0.23	-0.1
2,263,487	-		Rru_A1954	0.23	-0.1
2,263,487	-		Rru_A1954	0.23	-0.6
2,263,487	-		Rru_A1954	0.23	+0.1
2,263,487	-		Rru_A1954	0.23	+0.5
2,263,487	-		Rru_A1954	0.23	+0.6
2,263,487	-		Rru_A1954	0.23	-0.1
2,263,584	+		Rru_A1954	0.34	+0.4
2,263,584	+		Rru_A1954	0.34	-0.1
2,263,637	+		Rru_A1954	0.40	+0.7
2,263,637	+		Rru_A1954	0.40	+1.1
2,263,638	-		Rru_A1954	0.40	-0.1
2,263,638	-		Rru_A1954	0.40	-0.3
2,263,638	-		Rru_A1954	0.40	-0.1
2,263,771	+		Rru_A1954	0.54	+0.8
2,263,771	+		Rru_A1954	0.54	-0.1
2,263,771	+		Rru_A1954	0.54	+0.9
2,263,772	-		Rru_A1954	0.55	+1.5
2,263,772	-		Rru_A1954	0.55	-0.1
2,263,772	-		Rru_A1954	0.55	+1.0
2,263,804	+		Rru_A1954	0.58	-0.1
2,264,392	+				+0.6
2,264,392	+				-0.0
2,264,661	+		Rru_A1955	0.52	-0.0
2,264,661	+		Rru_A1955	0.52	+1.2
2,264,662	-		Rru_A1955	0.52	-0.0
2,264,987	+				-0.1
2,264,987	+				+1.0
2,264,988	-				-0.0
2,264,988	-				-0.1
2,265,011	+		Rru_A1956	0.13	+0.9
2,265,012	-		Rru_A1956	0.13	+0.2
2,265,117	+		Rru_A1956	0.28	-0.0
2,265,118	-		Rru_A1956	0.28	-0.4
2,265,118	-		Rru_A1956	0.28	-0.4