Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1942

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,249,592	-		Rru_A1941	0.58	-0.1
2,249,598	+		Rru_A1941	0.59	+2.3
2,249,598	+		Rru_A1941	0.59	-0.1
2,249,599	-		Rru_A1941	0.59	-1.1
2,249,646	+		Rru_A1941	0.61	+1.1
2,249,906	+		Rru_A1941	0.74	-0.1
2,249,906	+		Rru_A1941	0.74	+0.6
2,249,907	-		Rru_A1941	0.74	-0.1
2,250,048	+		Rru_A1941	0.81	-1.1
2,250,049	-		Rru_A1941	0.81	-0.1
2,250,049	-		Rru_A1941	0.81	-0.1
2,250,270	+				+1.1
2,250,815	+		Rru_A1942	0.46	+0.3
2,250,815	+		Rru_A1942	0.46	+0.5
2,250,816	-		Rru_A1942	0.47	-0.1
2,250,816	-		Rru_A1942	0.47	+0.8
2,250,816	-		Rru_A1942	0.47	-0.1
2,250,816	-		Rru_A1942	0.47	+0.2
2,250,816	-		Rru_A1942	0.47	-0.1
2,250,816	-		Rru_A1942	0.47	+0.4
2,250,929	+		Rru_A1942	0.60	-0.1
2,250,929	+		Rru_A1942	0.60	+0.6
2,251,401	+				-0.1
2,251,401	+				-1.6
2,251,401	+				-0.1
2,251,401	+				+0.7
2,251,402	-				+0.4
2,251,404	+				+0.2
2,251,405	-				-0.1
2,251,405	-				+1.4
2,251,425	+				-0.1
2,251,426	-				+1.2
2,251,593	+		Rru_A1943	0.20	+0.2
2,251,615	-		Rru_A1943	0.21	-1.1
2,251,615	-		Rru_A1943	0.21	-0.1
2,251,911	+		Rru_A1943	0.40	+0.7
2,251,911	+		Rru_A1943	0.40	+1.3
2,251,977	+		Rru_A1943	0.44	-1.1
2,251,977	+		Rru_A1943	0.44	-0.1
2,251,978	-		Rru_A1943	0.44	-1.1
2,251,978	-		Rru_A1943	0.44	+0.5
2,252,028	+		Rru_A1943	0.47	+0.9
2,252,028	+		Rru_A1943	0.47	-0.1
2,252,028	+		Rru_A1943	0.47	+0.1
2,252,029	-		Rru_A1943	0.47	+0.0
2,252,029	-		Rru_A1943	0.47	-0.6
2,252,029	-		Rru_A1943	0.47	-0.1
2,252,029	-		Rru_A1943	0.47	-0.1
2,252,136	+		Rru_A1943	0.54	-0.1
2,252,136	+		Rru_A1943	0.54	-0.1
2,252,137	-		Rru_A1943	0.54	-1.1