Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1916

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,219,920	+		Rru_A1915	0.59	-0.1
2,219,920	+		Rru_A1915	0.59	+0.4
2,219,921	-		Rru_A1915	0.59	+0.3
2,219,921	-		Rru_A1915	0.59	-0.1
2,219,921	-		Rru_A1915	0.59	-1.1
2,219,921	-		Rru_A1915	0.59	-1.1
2,220,026	+		Rru_A1915	0.68	-0.5
2,220,027	-		Rru_A1915	0.68	-0.1
2,220,209	+		Rru_A1915	0.84	-0.1
2,220,209	+		Rru_A1915	0.84	-0.1
2,220,209	+		Rru_A1915	0.84	+1.0
2,220,209	+		Rru_A1915	0.84	-2.6
2,220,209	+		Rru_A1915	0.84	-0.1
2,220,209	+		Rru_A1915	0.84	-0.1
2,220,209	+		Rru_A1915	0.84	-0.1
2,220,210	-		Rru_A1915	0.84	+0.7
2,220,210	-		Rru_A1915	0.84	-0.1
2,220,210	-		Rru_A1915	0.84	-0.1
2,220,291	-				-0.7
2,220,355	+				-0.1
2,220,421	+				-0.1
2,220,421	+				-0.1
2,220,421	+				-0.1
2,220,421	+				-0.1
2,220,422	-				-0.4
2,220,422	-				-0.3
2,220,682	+		Rru_A1916	0.13	+0.7
2,220,682	+		Rru_A1916	0.13	+0.2
2,220,682	+		Rru_A1916	0.13	+1.1
2,220,782	+		Rru_A1916	0.39	-0.1
2,220,782	+		Rru_A1916	0.39	+0.9
2,220,909	+		Rru_A1916	0.72	+1.5
2,221,108	-				-0.1
2,221,109	+				-0.9
2,221,110	-				+1.4
2,221,110	-				+0.7
2,221,110	-				+1.1
2,221,110	-				+0.4
2,221,117	+				+0.5
2,221,118	-				+0.1
2,221,122	+				-0.9
2,221,122	+				+0.5
2,221,123	-				-0.6
2,221,123	-				+0.8
2,221,125	+				+0.4
2,221,126	-				+1.5
2,221,297	+				-0.1
2,221,297	+				+0.1
2,221,298	-				-0.1
2,221,298	-				+0.1
2,221,298	-				+0.6
2,221,416	+				+0.2
2,221,417	-				-0.1
2,221,452	+		Rru_A1917	0.12	+0.8
2,221,629	+		Rru_A1917	0.23	-0.2
2,221,630	-		Rru_A1917	0.23	-0.1
2,221,630	-		Rru_A1917	0.23	-1.1
2,221,643	+		Rru_A1917	0.24	-0.1
2,221,643	+		Rru_A1917	0.24	+1.9
2,221,643	+		Rru_A1917	0.24	-0.1
2,221,644	-		Rru_A1917	0.24	+0.8
2,221,644	-		Rru_A1917	0.24	+0.5
2,221,644	-		Rru_A1917	0.24	+0.4
2,221,752	+		Rru_A1917	0.31	+1.7
2,221,785	+		Rru_A1917	0.33	-0.4
2,221,785	+		Rru_A1917	0.33	-0.1
2,221,785	+		Rru_A1917	0.33	+0.4
2,221,786	-		Rru_A1917	0.33	+0.4
2,221,786	-		Rru_A1917	0.33	+0.9
2,221,787	+		Rru_A1917	0.33	-0.1
2,221,787	+		Rru_A1917	0.33	+0.0
2,221,787	+		Rru_A1917	0.33	+0.8
2,221,788	-		Rru_A1917	0.33	-0.1
2,221,788	-		Rru_A1917	0.33	+0.6
2,221,788	-		Rru_A1917	0.33	-0.1
2,221,788	-		Rru_A1917	0.33	-0.1
2,221,869	+		Rru_A1917	0.38	-0.6
2,221,870	-		Rru_A1917	0.38	+2.4
2,221,870	-		Rru_A1917	0.38	-0.2
2,221,944	+		Rru_A1917	0.43	-0.1
2,221,945	-		Rru_A1917	0.43	-0.1