Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1901

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,201,356	+		Rru_A1899	0.77	+0.5
2,201,356	+		Rru_A1899	0.77	-0.1
2,201,356	+		Rru_A1899	0.77	+0.5
2,201,360	+		Rru_A1899	0.78	-0.1
2,201,360	+		Rru_A1899	0.78	-0.1
2,201,360	+		Rru_A1899	0.78	-0.1
2,201,360	+		Rru_A1899	0.78	+0.0
2,201,361	-		Rru_A1899	0.78	-0.1
2,201,361	-		Rru_A1899	0.78	+0.3
2,201,361	-		Rru_A1899	0.78	+0.6
2,201,625	+				-0.1
2,202,059	+		Rru_A1900	0.73	-1.1
2,202,137	+		Rru_A1900	0.90	+0.7
2,202,139	+				+1.2
2,202,182	+				+0.8
2,202,183	-				-0.1
2,202,183	-				-0.1
2,202,979	-		Rru_A1901	0.36	+0.3
2,202,979	-		Rru_A1901	0.36	+0.9
2,202,979	-		Rru_A1901	0.36	+0.4
2,202,979	-		Rru_A1901	0.36	-0.1
2,202,979	-		Rru_A1901	0.36	-0.5
2,203,573	+		Rru_A1901	0.65	+0.4
2,203,573	+		Rru_A1901	0.65	-0.1
2,203,573	+		Rru_A1901	0.65	+0.1
2,204,067	+		Rru_A1901	0.89	-0.1
2,204,068	-		Rru_A1901	0.89	+0.9
2,204,068	-		Rru_A1901	0.89	+0.6
2,204,069	+		Rru_A1901	0.89	-0.2
2,204,069	+		Rru_A1901	0.89	+0.1
2,204,069	+		Rru_A1901	0.89	+0.3
2,204,069	+		Rru_A1901	0.89	+0.1
2,204,070	-		Rru_A1901	0.89	-1.1
2,204,070	-		Rru_A1901	0.89	+0.4
2,204,130	+				-1.1
2,204,131	-				-0.1
2,204,233	+				+0.7
2,204,234	-				-0.1
2,204,405	+				+1.4
2,204,513	+				-0.2
2,204,513	+				+0.3
2,204,514	-				-1.6
2,204,628	+				-0.1
2,204,629	-				+1.0
2,204,629	-				-0.1
2,204,797	+		Rru_A1902	0.19	+0.6
2,204,797	+		Rru_A1902	0.19	-0.1
2,204,798	-		Rru_A1902	0.19	+0.8
2,204,798	-		Rru_A1902	0.19	+1.2
2,204,798	-		Rru_A1902	0.19	+1.4
2,204,798	-		Rru_A1902	0.19	-0.1
2,204,799	+		Rru_A1902	0.19	+0.4
2,204,799	+		Rru_A1902	0.19	-0.1
2,204,799	+		Rru_A1902	0.19	+1.0
2,204,800	-		Rru_A1902	0.19	+0.9
2,204,892	+		Rru_A1902	0.28	+1.3
2,204,892	+		Rru_A1902	0.28	-0.3
2,204,892	+		Rru_A1902	0.28	+0.3
2,204,893	-		Rru_A1902	0.28	+0.2
2,204,893	-		Rru_A1902	0.28	+0.5
2,204,893	-		Rru_A1902	0.28	+1.1
2,204,895	+		Rru_A1902	0.28	+0.7
2,204,895	+		Rru_A1902	0.28	+0.5
2,204,895	+		Rru_A1902	0.28	-1.1
2,204,896	-		Rru_A1902	0.28	+0.0
2,205,022	+		Rru_A1902	0.40	+0.7
2,205,023	-		Rru_A1902	0.40	-0.1
2,205,093	+		Rru_A1902	0.46	-0.1
2,205,093	+		Rru_A1902	0.46	+0.8
2,205,094	-		Rru_A1902	0.46	+0.2
2,205,094	-		Rru_A1902	0.46	-0.1
2,205,094	-		Rru_A1902	0.46	+1.8
2,205,207	+		Rru_A1902	0.57	-0.1
2,205,207	+		Rru_A1902	0.57	+0.5
2,205,208	-		Rru_A1902	0.57	-0.1
2,205,258	+		Rru_A1902	0.61	+0.2
2,205,258	+		Rru_A1902	0.61	+1.4
2,205,258	+		Rru_A1902	0.61	-1.1
2,205,259	-		Rru_A1902	0.62	+0.8
2,205,259	-		Rru_A1902	0.62	+1.1
2,205,259	-		Rru_A1902	0.62	-1.6
2,205,259	-		Rru_A1902	0.62	+1.4
2,205,271	-		Rru_A1902	0.63	-2.5
2,205,271	-		Rru_A1902	0.63	-0.1
2,205,285	+		Rru_A1902	0.64	+0.2
2,205,285	+		Rru_A1902	0.64	-0.1
2,205,286	-		Rru_A1902	0.64	-0.1
2,205,286	-		Rru_A1902	0.64	+0.2
2,205,286	-		Rru_A1902	0.64	-0.1
2,205,286	-		Rru_A1902	0.64	-0.1