Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1894

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,193,726	+		Rru_A1893	0.43	-0.9
2,193,726	+		Rru_A1893	0.43	-0.1
2,193,727	-		Rru_A1893	0.43	+0.6
2,193,727	-		Rru_A1893	0.43	-0.1
2,193,727	-		Rru_A1893	0.43	-0.1
2,193,727	-		Rru_A1893	0.43	-0.1
2,193,792	-		Rru_A1893	0.48	+0.2
2,193,801	-		Rru_A1893	0.49	-0.1
2,193,801	-		Rru_A1893	0.49	-0.3
2,193,801	-		Rru_A1893	0.49	-0.1
2,193,920	+		Rru_A1893	0.58	-0.1
2,193,920	+		Rru_A1893	0.58	-0.1
2,193,920	+		Rru_A1893	0.58	-0.1
2,193,920	+		Rru_A1893	0.58	-0.5
2,193,920	+		Rru_A1893	0.58	-0.2
2,193,921	-		Rru_A1893	0.58	-0.1
2,193,921	-		Rru_A1893	0.58	-0.1
2,193,921	-		Rru_A1893	0.58	-1.5
2,194,028	+		Rru_A1893	0.66	+0.1
2,194,028	+		Rru_A1893	0.66	-0.1
2,194,028	+		Rru_A1893	0.66	-1.1
2,194,028	+		Rru_A1893	0.66	+0.4
2,194,028	+		Rru_A1893	0.66	+0.3
2,194,029	-		Rru_A1893	0.66	+0.4
2,194,029	-		Rru_A1893	0.66	-0.1
2,194,029	-		Rru_A1893	0.66	-0.1
2,194,029	-		Rru_A1893	0.66	-0.1
2,194,029	-		Rru_A1893	0.66	-0.1
2,194,029	-		Rru_A1893	0.66	-0.1
2,194,226	+		Rru_A1893	0.82	-1.1
2,194,226	+		Rru_A1893	0.82	-0.1
2,194,500	-				+0.1
2,194,607	-				-1.5
2,194,607	-				-0.1
2,194,609	-				-0.5
2,195,369	-		Rru_A1894	0.40	-0.1
2,195,369	-		Rru_A1894	0.40	-2.2
2,195,798	-		Rru_A1894	0.59	-1.1
2,196,214	+		Rru_A1894	0.78	-0.1
2,196,214	+		Rru_A1894	0.78	-0.1
2,196,255	+		Rru_A1894	0.79	+0.9
2,196,255	+		Rru_A1894	0.79	-0.1
2,196,255	+		Rru_A1894	0.79	-1.6
2,196,256	-		Rru_A1894	0.79	-0.1
2,196,256	-		Rru_A1894	0.79	-0.1
2,196,256	-		Rru_A1894	0.79	-1.4
2,196,256	-		Rru_A1894	0.79	-1.2
2,196,725	+				-0.1
2,196,726	-				-0.1
2,196,816	+				-1.1
2,196,817	-				+1.3
2,196,817	-				+0.5
2,196,817	-				-0.1
2,196,821	+				-0.1
2,196,821	+				-1.6
2,196,821	+				+0.5
2,196,821	+				-0.1
2,196,821	+				-0.1
2,196,822	-				-0.7
2,196,822	-				-0.1
2,196,822	-				-0.1
2,196,843	+				+0.8
2,197,002	+				-0.1
2,197,002	+				+0.6
2,197,002	+				+0.4
2,197,137	-				-1.6
2,197,158	+				-0.1
2,197,158	+				-0.5
2,197,158	+				+1.2
2,197,159	-				-2.6
2,197,159	-				-1.6
2,197,159	-				-2.6
2,197,159	-				-1.1
2,197,159	-				-0.1
2,197,173	+				-0.1
2,197,174	-				-0.1
2,197,188	+				+0.2
2,197,189	-				-3.7
2,197,189	-				-2.9
2,197,519	-		Rru_A1895	0.65	-2.2
2,197,700	-				-4.2
2,197,700	-				-2.5