Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1862

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,159,356	+		Rru_A1861	0.40	-0.1
2,159,356	+		Rru_A1861	0.40	+0.4
2,159,356	+		Rru_A1861	0.40	-0.5
2,159,357	-		Rru_A1861	0.40	+1.5
2,159,476	+		Rru_A1861	0.53	+1.7
2,159,476	+		Rru_A1861	0.53	+0.1
2,159,477	-		Rru_A1861	0.53	-0.1
2,159,477	-		Rru_A1861	0.53	+0.3
2,159,477	-		Rru_A1861	0.53	+0.4
2,159,477	-		Rru_A1861	0.53	+0.6
2,159,800	+		Rru_A1861	0.88	-0.1
2,159,801	-		Rru_A1861	0.88	+0.2
2,159,815	+				-0.1
2,159,816	-				-0.1
2,159,926	+				-0.1
2,159,927	-				-1.1
2,159,935	+				-0.3
2,159,935	+				-0.1
2,159,936	-				+0.0
2,159,936	-				-0.4
2,159,936	-				-0.1
2,160,024	+				-0.1
2,160,024	+				-0.1
2,160,024	+				+0.2
2,160,025	-				+0.7
2,160,025	-				-0.5
2,160,025	-				-0.1
2,160,030	+				+0.4
2,160,030	+				+0.1
2,160,030	+				+0.7
2,160,030	+				-0.1
2,160,031	-				+1.2
2,160,031	-				+1.4
2,160,067	+				-0.1
2,160,067	+				-0.6
2,160,067	+				-0.1
2,160,067	+				-0.4
2,160,068	-				-0.1
2,160,068	-				-0.1
2,160,094	+		Rru_A1862	0.10	-0.1
2,160,191	+		Rru_A1862	0.47	-0.9
2,160,192	-		Rru_A1862	0.48	-0.4
2,160,202	+		Rru_A1862	0.51	+0.1
2,160,263	+		Rru_A1862	0.75	+0.1
2,160,263	+		Rru_A1862	0.75	-0.1
2,160,263	+		Rru_A1862	0.75	+0.8
2,160,272	+		Rru_A1862	0.78	-0.1
2,160,273	-		Rru_A1862	0.79	-0.1
2,160,273	-		Rru_A1862	0.79	+1.2
2,160,273	-		Rru_A1862	0.79	-0.1
2,160,407	-				-1.3
2,160,407	-				+0.5
2,160,422	+				+0.3
2,160,423	-				+0.2
2,160,423	-				-1.1
2,160,508	+		Rru_A1863	0.18	-0.1
2,160,509	-		Rru_A1863	0.18	+0.1
2,160,509	-		Rru_A1863	0.18	+0.2
2,160,509	-		Rru_A1863	0.18	-0.1
2,160,509	-		Rru_A1863	0.18	-0.1
2,160,568	+		Rru_A1863	0.28	-0.1
2,160,568	+		Rru_A1863	0.28	-0.1
2,160,568	+		Rru_A1863	0.28	-0.1
2,160,569	-		Rru_A1863	0.28	-0.1
2,160,569	-		Rru_A1863	0.28	-0.6
2,160,569	-		Rru_A1863	0.28	-0.1
2,160,569	-		Rru_A1863	0.28	+0.4
2,160,569	-		Rru_A1863	0.28	-1.1
2,160,569	-		Rru_A1863	0.28	-0.1
2,160,763	+		Rru_A1863	0.61	+0.1
2,160,763	+		Rru_A1863	0.61	-0.1
2,160,866	+		Rru_A1863	0.78	+0.9
2,160,866	+		Rru_A1863	0.78	+1.0
2,160,867	-		Rru_A1863	0.79	+0.5
2,160,867	-		Rru_A1863	0.79	-0.1
2,160,867	-		Rru_A1863	0.79	+0.5
2,160,867	-		Rru_A1863	0.79	+1.5
2,160,867	-		Rru_A1863	0.79	-0.5
2,160,867	-		Rru_A1863	0.79	+0.3
2,160,867	-		Rru_A1863	0.79	-0.1
2,160,869	-		Rru_A1863	0.79	-0.1