Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1816

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,111,016	+				+0.7
2,111,016	+				-1.1
2,111,017	-				-0.1
2,111,153	+		Rru_A1815	0.22	-0.1
2,111,190	+		Rru_A1815	0.25	+0.1
2,111,191	-		Rru_A1815	0.25	+0.7
2,111,198	+		Rru_A1815	0.26	-1.1
2,111,199	-		Rru_A1815	0.26	-0.1
2,111,199	-		Rru_A1815	0.26	-0.4
2,111,199	-		Rru_A1815	0.26	-0.1
2,111,244	-		Rru_A1815	0.31	+0.4
2,111,359	+		Rru_A1815	0.43	+0.3
2,111,359	+		Rru_A1815	0.43	+0.7
2,111,360	-		Rru_A1815	0.43	-1.1
2,111,478	+		Rru_A1815	0.55	+0.6
2,111,478	+		Rru_A1815	0.55	+0.3
2,111,478	+		Rru_A1815	0.55	+0.9
2,111,745	+		Rru_A1815	0.82	-0.1
2,111,746	-		Rru_A1815	0.83	+0.1
2,111,766	-		Rru_A1815	0.85	+0.7
2,111,864	+				-0.1
2,111,864	+				-0.1
2,111,865	-				-1.1
2,111,877	+				+0.2
2,111,878	-				+0.4
2,111,987	+				-0.1
2,112,355	+		Rru_A1816	0.22	+0.7
2,112,356	-		Rru_A1816	0.22	+1.0
2,112,356	-		Rru_A1816	0.22	-0.4
2,112,436	+		Rru_A1816	0.26	-0.1
2,112,436	+		Rru_A1816	0.26	-0.1
2,112,437	-		Rru_A1816	0.27	-0.1
2,112,437	-		Rru_A1816	0.27	-0.1
2,112,689	+		Rru_A1816	0.40	-0.1
2,112,689	+		Rru_A1816	0.40	-0.1
2,112,689	+		Rru_A1816	0.40	+0.4
2,112,689	+		Rru_A1816	0.40	-0.1
2,112,689	+		Rru_A1816	0.40	+0.5
2,112,690	-		Rru_A1816	0.41	-0.1
2,112,690	-		Rru_A1816	0.41	+0.0
2,112,690	-		Rru_A1816	0.41	+1.4
2,112,692	-		Rru_A1816	0.41	+0.8
2,112,692	-		Rru_A1816	0.41	-0.1
2,112,692	-		Rru_A1816	0.41	-0.7
2,112,692	-		Rru_A1816	0.41	-0.1
2,112,754	-		Rru_A1816	0.44	-0.1
2,112,799	+		Rru_A1816	0.47	-0.1
2,112,799	+		Rru_A1816	0.47	+0.4
2,112,799	+		Rru_A1816	0.47	-0.1
2,112,799	+		Rru_A1816	0.47	-0.1
2,112,799	+		Rru_A1816	0.47	-0.1
2,112,799	+		Rru_A1816	0.47	+0.1
2,112,799	+		Rru_A1816	0.47	-0.1
2,112,800	-		Rru_A1816	0.47	-0.1
2,112,800	-		Rru_A1816	0.47	-0.1
2,112,800	-		Rru_A1816	0.47	-0.1
2,112,800	-		Rru_A1816	0.47	-0.1
2,112,884	-		Rru_A1816	0.51	-0.1
2,112,962	-		Rru_A1816	0.56	-0.1
2,113,047	+		Rru_A1816	0.60	-0.2
2,113,047	+		Rru_A1816	0.60	-0.1
2,113,047	+		Rru_A1816	0.60	-0.1
2,113,047	+		Rru_A1816	0.60	+0.2
2,113,047	+		Rru_A1816	0.60	-0.2
2,113,047	+		Rru_A1816	0.60	-0.5
2,113,048	-		Rru_A1816	0.60	-0.1
2,113,048	-		Rru_A1816	0.60	-0.1
2,113,050	+		Rru_A1816	0.61	-0.1
2,113,051	-		Rru_A1816	0.61	-0.0
2,113,225	+		Rru_A1816	0.70	-0.4
2,113,225	+		Rru_A1816	0.70	-0.1
2,113,225	+		Rru_A1816	0.70	-0.2
2,113,225	+		Rru_A1816	0.70	-0.1
2,113,226	-		Rru_A1816	0.70	-1.4
2,113,226	-		Rru_A1816	0.70	-0.1
2,113,226	-		Rru_A1816	0.70	+0.5
2,113,265	-		Rru_A1816	0.72	-0.1
2,113,265	-		Rru_A1816	0.72	+0.3
2,113,310	-		Rru_A1816	0.75	-0.1
2,113,310	-		Rru_A1816	0.75	-0.1
2,113,312	+		Rru_A1816	0.75	-1.3
2,113,312	+		Rru_A1816	0.75	-0.1
2,113,312	+		Rru_A1816	0.75	-0.1
2,113,313	-		Rru_A1816	0.75	-0.1
2,113,313	-		Rru_A1816	0.75	+0.2
2,113,327	+		Rru_A1816	0.76	-0.1
2,113,327	+		Rru_A1816	0.76	-0.1
2,113,327	+		Rru_A1816	0.76	-0.6
2,113,328	-		Rru_A1816	0.76	-0.1
2,113,477	+		Rru_A1816	0.84	-1.0
2,113,604	+				-0.6
2,113,741	+				-1.1
2,113,741	+				+0.1
2,113,742	-				-0.1
2,113,752	+				-0.1
2,113,816	+				-0.1
2,113,847	-				-0.1
2,113,878	+				-0.1
2,113,878	+				-0.1
2,113,878	+				-0.1
2,113,878	+				+1.0
2,113,879	-				-0.1
2,114,096	-				+0.9
2,114,215	+		Rru_A1817	0.13	-0.2
2,114,215	+		Rru_A1817	0.13	-0.2
2,114,215	+		Rru_A1817	0.13	-0.1
2,114,216	-		Rru_A1817	0.13	+0.2
2,114,216	-		Rru_A1817	0.13	-0.1
2,114,216	-		Rru_A1817	0.13	-0.1
2,114,335	+		Rru_A1817	0.17	-0.1
2,114,335	+		Rru_A1817	0.17	+0.6
2,114,335	+		Rru_A1817	0.17	-0.1
2,114,335	+		Rru_A1817	0.17	+0.7
2,114,336	-		Rru_A1817	0.17	+0.4
2,114,336	-		Rru_A1817	0.17	+0.8
2,114,336	-		Rru_A1817	0.17	+0.3
2,114,394	+		Rru_A1817	0.19	-0.1
2,114,394	+		Rru_A1817	0.19	-0.4
2,114,395	-		Rru_A1817	0.19	+0.4
2,114,455	+		Rru_A1817	0.21	-0.1
2,114,455	+		Rru_A1817	0.21	-0.4
2,114,455	+		Rru_A1817	0.21	-0.1