Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1793

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,084,476	-		Rru_A1792	0.56	-1.1
2,084,663	+		Rru_A1792	0.66	-0.1
2,084,663	+		Rru_A1792	0.66	+0.4
2,084,663	+		Rru_A1792	0.66	+1.1
2,084,663	+		Rru_A1792	0.66	-0.1
2,084,663	+		Rru_A1792	0.66	-0.6
2,084,859	+		Rru_A1792	0.78	+0.1
2,084,934	+		Rru_A1792	0.82	-0.2
2,084,978	+		Rru_A1792	0.84	+0.1
2,085,000	+		Rru_A1792	0.86	-0.1
2,085,000	+		Rru_A1792	0.86	+0.7
2,085,001	-		Rru_A1792	0.86	+0.0
2,085,001	-		Rru_A1792	0.86	+0.2
2,085,001	-		Rru_A1792	0.86	-0.1
2,085,002	+		Rru_A1792	0.86	+0.5
2,085,084	+				+0.2
2,085,084	+				-0.1
2,085,085	-				-0.1
2,085,085	-				-0.7
2,085,085	-				+0.1
2,085,085	-				-0.1
2,085,106	+				-0.1
2,085,106	+				+0.0
2,085,107	-				+0.4
2,085,278	-				+0.1
2,085,278	-				-0.1
2,085,582	+		Rru_A1793	0.28	+0.9
2,085,582	+		Rru_A1793	0.28	+0.3
2,085,582	+		Rru_A1793	0.28	+0.5
2,085,582	+		Rru_A1793	0.28	+0.2
2,085,583	-		Rru_A1793	0.28	-0.1
2,085,583	-		Rru_A1793	0.28	+0.6
2,085,621	+		Rru_A1793	0.32	-0.1
2,085,621	+		Rru_A1793	0.32	-0.1
2,085,621	+		Rru_A1793	0.32	-0.1
2,085,622	-		Rru_A1793	0.32	-0.1
2,085,622	-		Rru_A1793	0.32	+1.2
2,085,622	-		Rru_A1793	0.32	-0.1
2,085,622	-		Rru_A1793	0.32	+0.2
2,085,622	-		Rru_A1793	0.32	+1.3
2,085,735	-		Rru_A1793	0.43	+0.4
2,085,942	+		Rru_A1793	0.62	+0.6
2,085,942	+		Rru_A1793	0.62	+0.6
2,085,942	+		Rru_A1793	0.62	+0.3
2,085,943	-		Rru_A1793	0.63	-0.1
2,085,943	-		Rru_A1793	0.63	+0.9
2,085,970	-		Rru_A1793	0.65	-0.1
2,085,979	+		Rru_A1793	0.66	-0.1
2,086,081	-		Rru_A1793	0.76	-0.1
2,086,081	-		Rru_A1793	0.76	+0.4
2,086,081	-		Rru_A1793	0.76	-0.1
2,086,210	-		Rru_A1793	0.88	+0.1
2,086,586	+		Rru_A1794	0.37	-1.1
2,086,663	+		Rru_A1794	0.48	-0.1
2,086,836	-		Rru_A1794	0.73	-0.1
2,086,859	+		Rru_A1794	0.77	-0.1
2,086,859	+		Rru_A1794	0.77	+0.4
2,086,860	-		Rru_A1794	0.77	+0.9
2,086,860	-		Rru_A1794	0.77	+0.7
2,087,269	-		Rru_A1795	0.15	+0.1
2,087,269	-		Rru_A1795	0.15	-0.1