Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1789

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,079,205	+		Rru_A1787	0.72	-0.1
2,079,206	-		Rru_A1787	0.72	+0.5
2,079,288	-		Rru_A1787	0.82	+0.5
2,079,363	+				+0.8
2,079,467	+				-0.5
2,079,681	-		Rru_A1788	0.25	-1.1
2,079,805	+		Rru_A1788	0.53	+0.7
2,079,831	-		Rru_A1788	0.59	-0.3
2,079,838	+		Rru_A1788	0.61	-0.1
2,080,007	+				+0.4
2,080,007	+				+1.2
2,080,007	+				+0.9
2,080,008	-				+0.5
2,080,061	+				-0.1
2,080,075	+				+1.5
2,080,075	+				+1.3
2,080,076	-				+0.9
2,080,153	-				-0.1
2,080,166	+				-0.1
2,080,166	+				-0.1
2,080,166	+				+0.3
2,080,167	-				-0.1
2,080,167	-				-0.1
2,080,167	-				-0.1
2,080,618	+		Rru_A1789	0.44	+0.6
2,080,618	+		Rru_A1789	0.44	-0.1
2,080,619	-		Rru_A1789	0.45	+0.2
2,080,619	-		Rru_A1789	0.45	+0.7
2,080,699	+		Rru_A1789	0.52	-0.1
2,080,699	+		Rru_A1789	0.52	-0.2
2,080,699	+		Rru_A1789	0.52	+0.7
2,080,699	+		Rru_A1789	0.52	+0.6
2,080,699	+		Rru_A1789	0.52	+0.2
2,080,700	-		Rru_A1789	0.52	+1.5
2,080,700	-		Rru_A1789	0.52	-0.1
2,080,700	-		Rru_A1789	0.52	+0.7
2,080,806	+		Rru_A1789	0.62	-1.1
2,080,855	+		Rru_A1789	0.67	-0.1
2,080,855	+		Rru_A1789	0.67	-0.1
2,080,855	+		Rru_A1789	0.67	-0.1
2,080,858	+		Rru_A1789	0.67	+1.2
2,080,858	+		Rru_A1789	0.67	-0.1
2,080,858	+		Rru_A1789	0.67	+0.5
2,080,858	+		Rru_A1789	0.67	+2.0
2,080,951	+		Rru_A1789	0.76	+0.1
2,080,951	+		Rru_A1789	0.76	-0.1
2,080,951	+		Rru_A1789	0.76	-1.1
2,080,952	-		Rru_A1789	0.76	+0.8
2,080,952	-		Rru_A1789	0.76	+1.4
2,080,952	-		Rru_A1789	0.76	+0.4
2,080,952	-		Rru_A1789	0.76	+1.0
2,080,952	-		Rru_A1789	0.76	-0.3
2,080,999	+		Rru_A1789	0.81	+2.4
2,080,999	+		Rru_A1789	0.81	-0.1
2,081,000	-		Rru_A1789	0.81	+0.4
2,081,000	-		Rru_A1789	0.81	+1.3
2,081,197	+				+1.0
2,081,197	+				+1.6
2,081,197	+				+1.3
2,081,197	+				-0.1
2,081,197	+				-0.1
2,081,198	-				-0.1
2,081,198	-				-0.7
2,081,198	-				+0.1
2,081,198	-				+0.4
2,081,198	-				-0.5
2,081,198	-				-0.2
2,081,198	-				+0.0
2,081,198	-				+0.3
2,081,198	-				-0.1
2,081,198	-				-0.1
2,081,227	+				+0.1
2,081,264	+				+0.9
2,081,372	-				-0.1
2,081,400	-		Rru_A1790	0.12	+0.1
2,081,400	-		Rru_A1790	0.12	-0.6
2,081,400	-		Rru_A1790	0.12	+0.6
2,081,502	+		Rru_A1790	0.21	-0.1
2,081,502	+		Rru_A1790	0.21	-0.1
2,081,502	+		Rru_A1790	0.21	+1.7
2,081,503	-		Rru_A1790	0.22	+2.9
2,081,503	-		Rru_A1790	0.22	-0.1
2,081,582	+		Rru_A1790	0.29	-0.1
2,081,582	+		Rru_A1790	0.29	+0.8
2,081,583	-		Rru_A1790	0.29	-1.1
2,081,670	+		Rru_A1790	0.36	+0.2
2,081,670	+		Rru_A1790	0.36	+0.9
2,081,670	+		Rru_A1790	0.36	-0.1
2,081,671	-		Rru_A1790	0.37	+1.9
2,081,671	-		Rru_A1790	0.37	+0.5
2,081,745	+		Rru_A1790	0.43	-0.1
2,081,745	+		Rru_A1790	0.43	+0.6
2,081,745	+		Rru_A1790	0.43	-0.1
2,081,745	+		Rru_A1790	0.43	-0.1
2,081,745	+		Rru_A1790	0.43	-0.1
2,081,745	+		Rru_A1790	0.43	-0.3
2,081,745	+		Rru_A1790	0.43	+0.5
2,081,746	-		Rru_A1790	0.43	-1.6
2,081,746	-		Rru_A1790	0.43	-1.1
2,081,746	-		Rru_A1790	0.43	+0.4
2,081,746	-		Rru_A1790	0.43	+0.5
2,081,746	-		Rru_A1790	0.43	-0.2