Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1786

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,075,843	+		Rru_A1784	0.72	-0.3
2,076,061	-				-0.1
2,076,061	-				-0.3
2,076,062	+				-0.1
2,076,076	-				-0.1
2,076,076	-				-0.1
2,076,190	+		Rru_A1785	0.22	-1.6
2,076,191	-		Rru_A1785	0.22	+2.1
2,076,191	-		Rru_A1785	0.22	-0.1
2,076,191	-		Rru_A1785	0.22	+0.7
2,076,191	-		Rru_A1785	0.22	+0.4
2,076,259	+		Rru_A1785	0.40	+0.9
2,076,259	+		Rru_A1785	0.40	+1.6
2,076,292	+		Rru_A1785	0.48	+1.1
2,076,293	-		Rru_A1785	0.48	+1.3
2,076,397	-		Rru_A1785	0.75	-0.1
2,076,397	-		Rru_A1785	0.75	+0.5
2,076,412	+		Rru_A1785	0.79	-0.1
2,076,413	-		Rru_A1785	0.79	+0.8
2,076,487	+				+0.8
2,076,487	+				+0.7
2,076,487	+				-0.1
2,076,487	+				+0.7
2,076,488	-				+0.4
2,076,488	-				+0.3
2,076,488	-				-0.4
2,076,488	-				-0.1
2,076,488	-				+1.1
2,076,488	-				+1.1
2,076,490	+				+1.1
2,076,490	+				+1.1
2,076,491	-				+0.4
2,076,491	-				+0.4
2,076,491	-				+0.7
2,076,557	+				-0.1
2,076,557	+				+2.1
2,076,557	+				-0.1
2,076,571	+				+0.7
2,076,616	+				+1.5
2,076,677	+				+0.1
2,076,740	+				-4.1
2,077,037	+		Rru_A1786	0.19	-0.1
2,077,037	+		Rru_A1786	0.19	-1.1
2,077,037	+		Rru_A1786	0.19	-1.1
2,077,037	+		Rru_A1786	0.19	-0.1
2,077,037	+		Rru_A1786	0.19	-0.8
2,077,037	+		Rru_A1786	0.19	-3.1
2,077,037	+		Rru_A1786	0.19	-2.6
2,077,037	+		Rru_A1786	0.19	-0.1
2,077,037	+		Rru_A1786	0.19	-0.1
2,077,038	-		Rru_A1786	0.19	-0.1
2,077,038	-		Rru_A1786	0.19	-1.3
2,077,049	+		Rru_A1786	0.20	-3.3
2,077,050	-		Rru_A1786	0.20	-2.6
2,077,091	+		Rru_A1786	0.22	-3.4
2,077,091	+		Rru_A1786	0.22	-1.7
2,077,091	+		Rru_A1786	0.22	-2.6
2,077,091	+		Rru_A1786	0.22	-2.5
2,077,091	+		Rru_A1786	0.22	-2.5
2,077,092	-		Rru_A1786	0.22	-0.1
2,077,138	-		Rru_A1786	0.25	-0.1
2,077,253	+		Rru_A1786	0.31	-2.4
2,077,253	+		Rru_A1786	0.31	-3.9
2,077,254	-		Rru_A1786	0.31	-1.4
2,077,283	+		Rru_A1786	0.32	-3.6
2,077,283	+		Rru_A1786	0.32	-2.9
2,077,470	+		Rru_A1786	0.42	-5.0
2,077,470	+		Rru_A1786	0.42	-3.5
2,077,470	+		Rru_A1786	0.42	-2.3
2,077,471	-		Rru_A1786	0.42	-0.1
2,077,471	-		Rru_A1786	0.42	-2.6
2,077,471	-		Rru_A1786	0.42	-1.3
2,077,565	+		Rru_A1786	0.47	-0.5
2,077,565	+		Rru_A1786	0.47	-0.1
2,077,565	+		Rru_A1786	0.47	-0.1
2,077,565	+		Rru_A1786	0.47	-2.4
2,077,565	+		Rru_A1786	0.47	-2.9
2,077,565	+		Rru_A1786	0.47	-3.2
2,077,565	+		Rru_A1786	0.47	-4.0
2,077,565	+		Rru_A1786	0.47	-0.1
2,077,565	+		Rru_A1786	0.47	-0.1
2,077,565	+		Rru_A1786	0.47	-0.1
2,077,565	+		Rru_A1786	0.47	-2.9
2,077,566	-		Rru_A1786	0.47	-2.5
2,077,566	-		Rru_A1786	0.47	-1.1
2,077,566	-		Rru_A1786	0.47	-0.1
2,077,566	-		Rru_A1786	0.47	-2.7
2,077,566	-		Rru_A1786	0.47	-0.1
2,077,566	-		Rru_A1786	0.47	-0.1
2,077,566	-		Rru_A1786	0.47	-0.1
2,077,566	-		Rru_A1786	0.47	+0.9
2,077,689	+		Rru_A1786	0.54	-1.5
2,077,690	-		Rru_A1786	0.54	-1.5
2,077,790	+		Rru_A1786	0.59	-0.1
2,077,790	+		Rru_A1786	0.59	-2.1
2,077,790	+		Rru_A1786	0.59	-3.9
2,077,791	-		Rru_A1786	0.59	-2.9
2,077,791	-		Rru_A1786	0.59	+0.7
2,078,213	+		Rru_A1786	0.82	-0.1
2,078,213	+		Rru_A1786	0.82	-0.1
2,078,213	+		Rru_A1786	0.82	-2.1
2,078,214	-		Rru_A1786	0.82	-1.1
2,078,214	-		Rru_A1786	0.82	-4.0
2,078,214	-		Rru_A1786	0.82	-2.8
2,078,214	-		Rru_A1786	0.82	-2.5
2,078,214	-		Rru_A1786	0.82	-3.0
2,078,214	-		Rru_A1786	0.82	-0.1
2,078,253	+		Rru_A1786	0.84	-2.6
2,078,254	-		Rru_A1786	0.84	-0.1
2,078,254	-		Rru_A1786	0.84	-0.1
2,078,254	-		Rru_A1786	0.84	-2.8
2,078,255	+		Rru_A1786	0.84	-3.5
2,078,255	+		Rru_A1786	0.84	-0.1
2,078,255	+		Rru_A1786	0.84	-2.1
2,078,255	+		Rru_A1786	0.84	-0.1
2,078,255	+		Rru_A1786	0.84	-3.2
2,078,255	+		Rru_A1786	0.84	-3.9
2,078,256	-		Rru_A1786	0.84	-3.5
2,078,256	-		Rru_A1786	0.84	-2.1
2,078,256	-		Rru_A1786	0.84	-2.1
2,078,616	+				+0.7
2,078,616	+				+0.6
2,078,616	+				-1.1
2,078,638	+				+0.8
2,078,638	+				+0.4
2,078,639	-				-0.1
2,078,675	-				-0.1
2,078,777	+		Rru_A1787	0.18	+2.1
2,078,778	-		Rru_A1787	0.18	-0.1
2,078,778	-		Rru_A1787	0.18	-0.1
2,078,778	-		Rru_A1787	0.18	-0.2
2,078,884	+		Rru_A1787	0.31	-1.1
2,078,884	+		Rru_A1787	0.31	-0.1
2,078,884	+		Rru_A1787	0.31	+0.5
2,078,885	-		Rru_A1787	0.31	+1.2
2,078,896	+		Rru_A1787	0.33	+0.7
2,078,896	+		Rru_A1787	0.33	-0.5
2,078,897	-		Rru_A1787	0.33	-0.1
2,078,897	-		Rru_A1787	0.33	+1.3
2,079,205	+		Rru_A1787	0.72	-0.1
2,079,206	-		Rru_A1787	0.72	+0.5
2,079,288	-		Rru_A1787	0.82	+0.5
2,079,363	+				+0.8
2,079,467	+				-0.5