Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1771

Experiment: acetate; Light intensity 9 uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRru_A1770 and Rru_A1771 are separated by 89 nucleotidesRru_A1771 and Rru_A1772 are separated by 45 nucleotidesRru_A1772 and Rru_A1773 are separated by 76 nucleotides Rru_A1770: Rru_A1770 - Serine--tRNA ligase (NCBI), at 2,062,286 to 2,063,557 _A1770 Rru_A1771: Rru_A1771 - Sec-independent periplasmic protein translocase (NCBI), at 2,063,647 to 2,064,618 _A1771 Rru_A1772: Rru_A1772 - Twin-arginine translocation protein TatB (NCBI), at 2,064,664 to 2,065,116 _A1772 Rru_A1773: Rru_A1773 - Twin-arginine translocation protein TatA/E (NCBI), at 2,065,193 to 2,065,483 _A1773 Position (kb) 2063 2064 2065Strain fitness (log2 ratio) -1 0 1at 2063.758 kb on - strand, within Rru_A1771at 2065.563 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction acetate; Light intensity 9 uM
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2,063,758 - Rru_A1771 0.11 -0.5
2,065,563 - -0.1

Or see this region's nucleotide sequence