Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1729

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,024,082	-		Rru_A1728	0.63	-0.1
2,024,547	+		Rru_A1728	0.85	-0.1
2,025,198	+		Rru_A1729	0.43	+0.8
2,025,198	+		Rru_A1729	0.43	-0.1
2,025,429	+		Rru_A1729	0.73	+0.8
2,025,430	-		Rru_A1729	0.73	+1.5
2,025,430	-		Rru_A1729	0.73	+1.6
2,025,430	-		Rru_A1729	0.73	-1.1
2,025,430	-		Rru_A1729	0.73	+0.8
2,025,540	+		Rru_A1729	0.87	+0.5
2,025,549	-		Rru_A1729	0.89	+1.3
2,025,700	+				-0.1
2,025,705	+				+0.2
2,025,705	+				+1.5
2,025,705	+				-0.1
2,025,706	-				+0.3
2,025,710	+				-0.1
2,025,711	-				-0.6
2,025,917	+		Rru_A1730	0.28	-0.1
2,026,034	+		Rru_A1730	0.51	+0.6
2,026,035	-		Rru_A1730	0.51	-0.8
2,026,035	-		Rru_A1730	0.51	-0.1
2,026,035	-		Rru_A1730	0.51	-1.1
2,026,035	-		Rru_A1730	0.51	-0.1
2,026,070	-		Rru_A1730	0.57	-0.1
2,026,341	+				-0.8
2,026,342	-				-0.1
2,026,342	-				-0.1
2,026,343	+				+0.1
2,026,343	+				-0.3
2,026,343	+				+0.9
2,026,343	+				+0.1
2,026,343	+				+0.2
2,026,344	-				+1.2
2,026,344	-				+0.8
2,026,515	-		Rru_A1731	0.60	+0.5
2,026,515	-		Rru_A1731	0.60	-0.1
2,026,611	-		Rru_A1731	0.89	-0.9
2,026,611	-		Rru_A1731	0.89	+0.3