Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1723

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,014,669	-		Rru_A1721	0.67	-0.1
2,014,699	+		Rru_A1721	0.72	-0.0
2,014,700	-		Rru_A1721	0.72	-0.1
2,014,700	-		Rru_A1721	0.72	+0.4
2,014,700	-		Rru_A1721	0.72	+0.0
2,014,728	+		Rru_A1721	0.77	-0.1
2,014,729	-		Rru_A1721	0.77	-0.1
2,014,729	-		Rru_A1721	0.77	+0.6
2,014,729	-		Rru_A1721	0.77	-0.3
2,014,779	+		Rru_A1721	0.86	-0.1
2,014,779	+		Rru_A1721	0.86	-1.6
2,014,780	-		Rru_A1721	0.87	+0.5
2,014,780	-		Rru_A1721	0.87	-0.1
2,014,780	-		Rru_A1721	0.87	-0.1
2,014,961	+				+0.3
2,014,962	-				-0.1
2,015,066	-		Rru_A1722	0.20	-0.1
2,015,162	+		Rru_A1722	0.35	-0.1
2,015,162	+		Rru_A1722	0.35	-0.1
2,015,162	+		Rru_A1722	0.35	+1.2
2,015,162	+		Rru_A1722	0.35	+1.2
2,015,162	+		Rru_A1722	0.35	+0.2
2,015,162	+		Rru_A1722	0.35	-0.1
2,015,163	-		Rru_A1722	0.35	-1.3
2,015,163	-		Rru_A1722	0.35	-0.1
2,015,163	-		Rru_A1722	0.35	+0.9
2,015,337	-		Rru_A1722	0.63	+0.2
2,015,337	-		Rru_A1722	0.63	-0.1
2,015,352	-		Rru_A1722	0.65	-0.4
2,015,352	-		Rru_A1722	0.65	-0.1
2,015,426	-		Rru_A1722	0.77	-0.1
2,015,494	-		Rru_A1722	0.88	+0.8
2,015,508	+		Rru_A1722	0.90	+1.2
2,015,509	-				+1.2
2,015,521	+				+0.3
2,015,592	+				+0.8
2,015,593	-				-0.1
2,015,673	+				+0.1
2,015,821	+		Rru_A1723	0.16	-0.1
2,015,821	+		Rru_A1723	0.16	+0.6
2,015,823	+		Rru_A1723	0.17	+1.0
2,015,824	-		Rru_A1723	0.17	-0.5
2,015,824	-		Rru_A1723	0.17	+0.1
2,015,875	+		Rru_A1723	0.20	+0.2
2,015,875	+		Rru_A1723	0.20	+0.9
2,015,875	+		Rru_A1723	0.20	+0.7
2,015,875	+		Rru_A1723	0.20	+0.7
2,015,875	+		Rru_A1723	0.20	-0.1
2,015,875	+		Rru_A1723	0.20	-1.1
2,015,876	-		Rru_A1723	0.20	+0.5
2,015,920	+		Rru_A1723	0.24	-0.1
2,015,920	+		Rru_A1723	0.24	+0.1
2,015,920	+		Rru_A1723	0.24	+0.6
2,016,002	-		Rru_A1723	0.29	-0.1
2,016,019	+		Rru_A1723	0.31	+0.1
2,016,020	-		Rru_A1723	0.31	-0.1
2,016,042	+		Rru_A1723	0.32	+0.2
2,016,042	+		Rru_A1723	0.32	-0.6
2,016,360	+		Rru_A1723	0.55	-0.2
2,016,361	-		Rru_A1723	0.55	-0.2
2,016,361	-		Rru_A1723	0.55	-0.1
2,016,361	-		Rru_A1723	0.55	-1.0
2,016,361	-		Rru_A1723	0.55	+0.5
2,016,441	+		Rru_A1723	0.61	-0.1
2,016,441	+		Rru_A1723	0.61	+1.1
2,016,442	-		Rru_A1723	0.61	-0.1
2,016,718	+		Rru_A1723	0.81	+0.4
2,016,943	+				-0.1
2,016,943	+				+0.3
2,016,943	+				-0.1
2,016,944	-				-1.1
2,016,944	-				+1.0
2,016,944	-				-0.1
2,016,944	-				-0.1
2,016,944	-				+0.6
2,017,006	+				-0.1
2,017,006	+				+0.5
2,017,007	-				-0.1
2,017,224	+				-0.1
2,017,225	-				-0.1
2,017,261	+		Rru_A1724	0.13	+0.2
2,017,262	-		Rru_A1724	0.13	+0.6
2,017,264	+		Rru_A1724	0.14	+0.8
2,017,265	-		Rru_A1724	0.14	+0.5
2,017,450	+		Rru_A1724	0.41	+0.5
2,017,451	-		Rru_A1724	0.41	-0.2
2,017,732	+		Rru_A1724	0.83	-0.1
2,017,732	+		Rru_A1724	0.83	-2.6
2,017,732	+		Rru_A1724	0.83	+0.1
2,017,733	-		Rru_A1724	0.83	+1.3
2,017,847	-				-0.1