Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1718

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,008,578	+				-0.2
2,008,578	+				+0.5
2,008,579	-				-0.1
2,008,743	+		Rru_A1717	0.54	-0.1
2,008,743	+		Rru_A1717	0.54	+0.7
2,008,744	-		Rru_A1717	0.54	-0.5
2,008,744	-		Rru_A1717	0.54	-0.1
2,008,744	-		Rru_A1717	0.54	-0.1
2,008,801	+		Rru_A1717	0.70	+0.4
2,008,802	-		Rru_A1717	0.70	-0.1
2,008,802	-		Rru_A1717	0.70	-0.1
2,008,802	-		Rru_A1717	0.70	-0.1
2,008,802	-		Rru_A1717	0.70	+0.1
2,009,073	+				-0.1
2,009,074	-				-0.6
2,009,074	-				-0.1
2,009,075	+				-0.1
2,009,075	+				-0.5
2,009,075	+				-0.0
2,009,075	+				+0.4
2,009,075	+				-1.1
2,009,076	-				-1.1
2,009,076	-				-1.1
2,009,076	-				+0.4
2,009,076	-				-0.1
2,009,076	-				+0.5
2,009,076	-				-0.1
2,009,076	-				-0.6
2,009,076	-				-0.1
2,009,076	-				-0.1
2,009,076	-				-0.1
2,009,081	+				+1.0
2,009,081	+				+0.2
2,009,081	+				+0.7
2,009,082	-				-1.1
2,009,082	-				-0.1
2,009,082	-				-0.6
2,009,089	+				-0.1
2,009,089	+				-0.1
2,009,089	+				-0.1
2,009,089	+				+0.8
2,009,090	-				+0.6
2,009,120	+				-0.1
2,009,171	+				-0.1
2,009,171	+				+0.3
2,009,171	+				-1.1
2,009,171	+				+0.9
2,009,227	+				+0.0
2,009,228	-				-0.1
2,009,306	-				-0.1
2,009,332	+				-0.6
2,009,332	+				+0.7
2,009,332	+				-0.4
2,009,333	-				-0.9
2,009,333	-				-0.5
2,009,470	-				-0.3
2,009,533	+				+0.4
2,009,533	+				-0.1
2,009,534	-				-0.1
2,009,534	-				+0.2
2,009,657	-				+0.3
2,009,673	+				-0.5
2,009,739	+		Rru_A1718	0.12	-0.1
2,009,739	+		Rru_A1718	0.12	-0.3
2,009,739	+		Rru_A1718	0.12	+0.1
2,009,739	+		Rru_A1718	0.12	-1.2
2,009,740	-		Rru_A1718	0.12	-0.1
2,009,740	-		Rru_A1718	0.12	+0.9
2,009,743	+		Rru_A1718	0.13	+0.1
2,009,743	+		Rru_A1718	0.13	-0.5
2,009,743	+		Rru_A1718	0.13	-0.1
2,009,744	-		Rru_A1718	0.13	+0.2
2,009,744	-		Rru_A1718	0.13	+1.1
2,009,852	-		Rru_A1718	0.17	-0.1
2,009,858	-		Rru_A1718	0.17	-1.1
2,009,858	-		Rru_A1718	0.17	-0.2
2,009,858	-		Rru_A1718	0.17	-0.1
2,009,859	+		Rru_A1718	0.17	-0.1
2,009,859	+		Rru_A1718	0.17	-0.1
2,009,859	+		Rru_A1718	0.17	+0.1
2,009,860	-		Rru_A1718	0.18	-0.3
2,009,860	-		Rru_A1718	0.18	+0.2
2,009,950	-		Rru_A1718	0.21	-0.1
2,009,950	-		Rru_A1718	0.21	-0.1
2,009,987	+		Rru_A1718	0.23	-0.1
2,009,987	+		Rru_A1718	0.23	-1.1
2,009,988	-		Rru_A1718	0.23	-0.7
2,010,053	+		Rru_A1718	0.26	-1.0
2,010,053	+		Rru_A1718	0.26	-0.4
2,010,053	+		Rru_A1718	0.26	-0.2
2,010,054	-		Rru_A1718	0.26	-0.2
2,010,054	-		Rru_A1718	0.26	-0.1
2,010,054	-		Rru_A1718	0.26	-0.2
2,010,055	+		Rru_A1718	0.26	-0.1
2,010,055	+		Rru_A1718	0.26	-0.1
2,010,055	+		Rru_A1718	0.26	-0.1
2,010,056	-		Rru_A1718	0.26	+0.3
2,010,056	-		Rru_A1718	0.26	+0.2
2,010,169	+		Rru_A1718	0.31	-0.3
2,010,170	-		Rru_A1718	0.31	-0.1
2,010,221	-		Rru_A1718	0.33	-0.1
2,010,880	+		Rru_A1718	0.61	-0.4
2,010,881	-		Rru_A1718	0.61	-0.1
2,010,881	-		Rru_A1718	0.61	-0.1
2,010,988	+		Rru_A1718	0.66	-1.0
2,011,045	+		Rru_A1718	0.68	-0.1
2,011,045	+		Rru_A1718	0.68	-0.2
2,011,046	-		Rru_A1718	0.68	-0.1
2,011,046	-		Rru_A1718	0.68	-0.1
2,011,057	+		Rru_A1718	0.69	-0.1
2,011,058	-		Rru_A1718	0.69	+0.1
2,011,127	-		Rru_A1718	0.72	+0.4
2,011,265	+		Rru_A1718	0.77	-0.9
2,011,266	-		Rru_A1718	0.77	-0.1
2,011,266	-		Rru_A1718	0.77	-0.9
2,011,360	+		Rru_A1718	0.81	-1.3
2,011,361	-		Rru_A1718	0.82	+0.3
2,011,361	-		Rru_A1718	0.82	-0.1
2,011,361	-		Rru_A1718	0.82	-0.9
2,011,434	+		Rru_A1718	0.85	-0.1
2,011,434	+		Rru_A1718	0.85	-0.1
2,011,434	+		Rru_A1718	0.85	+0.0
2,011,434	+		Rru_A1718	0.85	-0.1
2,011,434	+		Rru_A1718	0.85	-0.6
2,011,435	-		Rru_A1718	0.85	-0.1
2,011,435	-		Rru_A1718	0.85	+1.9
2,011,435	-		Rru_A1718	0.85	+0.1
2,011,435	-		Rru_A1718	0.85	+0.7
2,011,435	-		Rru_A1718	0.85	+0.0
2,011,435	-		Rru_A1718	0.85	-0.1
2,011,435	-		Rru_A1718	0.85	-1.5
2,011,435	-		Rru_A1718	0.85	-0.1
2,011,435	-		Rru_A1718	0.85	-1.4
2,011,435	-		Rru_A1718	0.85	-0.4
2,011,435	-		Rru_A1718	0.85	-0.5
2,011,435	-		Rru_A1718	0.85	-0.9
2,011,435	-		Rru_A1718	0.85	+1.4
2,011,435	-		Rru_A1718	0.85	-0.1
2,011,435	-		Rru_A1718	0.85	-0.1
2,011,441	+		Rru_A1718	0.85	-0.4
2,011,441	+		Rru_A1718	0.85	-1.3
2,011,441	+		Rru_A1718	0.85	-0.8
2,011,441	+		Rru_A1718	0.85	-0.3
2,011,549	+		Rru_A1718	0.90	-0.3
2,011,549	+		Rru_A1718	0.90	-0.1
2,011,551	+		Rru_A1718	0.90	-0.1
2,011,551	+		Rru_A1718	0.90	-0.3
2,011,551	+		Rru_A1718	0.90	-0.1
2,011,551	+		Rru_A1718	0.90	-0.8
2,011,551	+		Rru_A1718	0.90	-0.4
2,011,551	+		Rru_A1718	0.90	-0.1
2,011,551	+		Rru_A1718	0.90	-0.2
2,011,551	+		Rru_A1718	0.90	+2.5
2,011,552	-		Rru_A1718	0.90	-0.1
2,011,552	-		Rru_A1718	0.90	-0.1
2,011,552	-		Rru_A1718	0.90	-1.4
2,011,552	-		Rru_A1718	0.90	-0.1
2,011,552	-		Rru_A1718	0.90	-0.1
2,011,552	-		Rru_A1718	0.90	+0.8
2,011,552	-		Rru_A1718	0.90	-0.1
2,011,552	-		Rru_A1718	0.90	-0.3
2,011,737	+				+0.5
2,011,737	+				-0.1
2,011,737	+				+0.2
2,011,738	-				-0.0
2,011,738	-				-0.1
2,011,901	+		Rru_A1719	0.14	+0.9
2,011,901	+		Rru_A1719	0.14	+0.0
2,012,274	+		Rru_A1719	0.61	-0.3
2,012,275	-		Rru_A1719	0.61	-0.1
2,012,606	+				-0.3
2,012,606	+				-0.2
2,012,648	+				+0.5
2,012,649	-				-2.4
2,012,649	-				+0.8
2,012,777	-				-0.1