Strain Fitness in Rhodospirillum rubrum S1H around Rru_AR0033

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,997,313	+		Rru_A1706	0.41	+0.2
1,997,313	+		Rru_A1706	0.41	-0.1
1,997,313	+		Rru_A1706	0.41	-0.1
1,997,313	+		Rru_A1706	0.41	+0.3
1,997,314	-		Rru_A1706	0.41	+1.2
1,997,314	-		Rru_A1706	0.41	+0.7
1,997,314	-		Rru_A1706	0.41	+0.6
1,997,314	-		Rru_A1706	0.41	+1.2
1,997,314	-		Rru_A1706	0.41	-0.1
1,997,314	-		Rru_A1706	0.41	-0.2
1,997,379	+		Rru_A1706	0.45	-1.1
1,997,379	+		Rru_A1706	0.45	+0.1
1,997,379	+		Rru_A1706	0.45	-1.1
1,997,380	-		Rru_A1706	0.45	+0.8
1,997,646	+		Rru_A1706	0.65	-1.2
1,997,646	+		Rru_A1706	0.65	-1.1
1,997,647	-		Rru_A1706	0.65	+0.4
1,997,647	-		Rru_A1706	0.65	-0.1
1,997,647	-		Rru_A1706	0.65	-0.1
1,997,739	+		Rru_A1706	0.72	-0.1
1,998,100	+				-0.1
1,998,100	+				-1.6
1,998,102	+				-0.1
1,998,102	+				-0.1
1,998,103	-				+0.5
1,998,103	-				+1.0
1,998,103	-				-0.1
1,998,103	-				-0.2
1,998,124	+				-0.1
1,998,124	+				-0.1
1,998,124	+				-1.1
1,998,225	+				-0.1
1,998,225	+				-0.1
1,998,225	+				+0.0
1,998,225	+				-0.1
1,998,225	+				-0.1
1,998,365	-				+0.6
1,998,365	-				+1.5
1,998,392	+				-0.1
1,998,393	-				-0.1
1,998,393	-				+0.5
1,998,393	-				-0.1
1,998,407	-				-0.1
1,998,444	+				-0.1
1,998,447	-				-0.4
1,998,447	-				-1.2
1,998,509	-				+0.7
1,998,535	+				-0.1
1,998,535	+				+0.0
1,998,535	+				-0.3
1,998,545	+				-0.0
1,998,555	+				+0.9
1,998,592	+				+0.4
1,998,617	+				-0.6
1,998,617	+				-0.1
1,998,618	-				-0.1
1,998,649	-				-0.1
1,998,669	+				+0.8
1,998,729	-				+0.3
1,998,729	-				+0.0
1,998,729	-				-0.1
1,998,729	-				-0.1
1,998,741	-				-0.3
1,998,741	-				+0.2
1,998,768	+				+0.4
1,998,768	+				+0.1
1,998,769	-				-1.0
1,998,862	-				-0.1
1,998,862	-				-0.2
1,998,862	-				+0.0
1,998,862	-				-0.2
1,998,862	-				-0.1
1,998,887	+				-1.1
1,998,887	+				-1.1
1,998,887	+				+0.5
1,998,887	+				+1.3
1,998,887	+				+0.3
1,998,888	-				-0.6
1,998,888	-				-0.1
1,998,896	+				+0.8
1,998,896	+				-0.2
1,998,897	-				-0.1
1,999,057	-				-0.0
1,999,057	-				-0.1
1,999,131	-				+0.4
1,999,131	-				+1.0
1,999,177	-				+0.0
1,999,177	-				+0.3
1,999,228	+				+0.8
1,999,228	+				+0.5
1,999,228	+				+0.3
1,999,229	-				-0.1
1,999,229	-				+0.1
1,999,229	-				+0.4
1,999,229	-				+1.5