Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1704
Experiment: acetate; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | acetate; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
1,995,544 | - | +1.1 | |||
1,995,877 | + | Rru_A1705 | 0.20 | +1.1 | |
1,995,877 | + | Rru_A1705 | 0.20 | +0.8 | |
1,995,878 | - | Rru_A1705 | 0.20 | +1.1 | |
1,995,878 | - | Rru_A1705 | 0.20 | -0.1 | |
1,995,878 | - | Rru_A1705 | 0.20 | -0.1 | |
1,996,115 | - | Rru_A1705 | 0.41 | -0.1 | |
1,996,201 | + | Rru_A1705 | 0.49 | +0.6 | |
1,996,201 | + | Rru_A1705 | 0.49 | +0.6 | |
1,996,202 | - | Rru_A1705 | 0.49 | +1.3 | |
1,996,202 | - | Rru_A1705 | 0.49 | +1.7 | |
1,996,202 | - | Rru_A1705 | 0.49 | +1.5 | |
1,996,436 | + | Rru_A1705 | 0.70 | -0.1 | |
1,996,437 | - | Rru_A1705 | 0.70 | -0.1 |
Or see this region's nucleotide sequence