Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1694

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,984,473	-		Rru_A1693	0.34	-0.1
1,984,827	-		Rru_A1693	0.62	-0.3
1,984,844	+		Rru_A1693	0.64	-0.1
1,984,859	+		Rru_A1693	0.65	-0.4
1,984,860	-		Rru_A1693	0.65	-0.1
1,984,860	-		Rru_A1693	0.65	-0.1
1,984,938	-		Rru_A1693	0.71	-0.1
1,984,939	+		Rru_A1693	0.71	+0.2
1,984,940	-		Rru_A1693	0.71	+0.1
1,984,940	-		Rru_A1693	0.71	-0.1
1,984,940	-		Rru_A1693	0.71	-0.1
1,984,940	-		Rru_A1693	0.71	-0.1
1,984,940	-		Rru_A1693	0.71	-0.1
1,985,021	+		Rru_A1693	0.78	+0.2
1,985,021	+		Rru_A1693	0.78	+0.8
1,985,021	+		Rru_A1693	0.78	-0.1
1,985,021	+		Rru_A1693	0.78	+0.6
1,985,021	+		Rru_A1693	0.78	-0.1
1,985,021	+		Rru_A1693	0.78	-0.1
1,985,021	+		Rru_A1693	0.78	+0.5
1,985,021	+		Rru_A1693	0.78	+0.7
1,985,022	-		Rru_A1693	0.78	-0.1
1,985,023	+		Rru_A1693	0.78	+0.4
1,985,162	+		Rru_A1693	0.89	+0.4
1,985,163	-		Rru_A1693	0.89	+0.1
1,985,163	-		Rru_A1693	0.89	-0.1
1,985,163	-		Rru_A1693	0.89	+0.0
1,985,177	+				-0.1
1,985,237	+				+1.3
1,985,238	-				+0.1
1,985,239	+				+1.1
1,985,240	-				-0.1
1,985,240	-				+0.3
1,985,240	-				-0.8
1,985,249	+				+0.6
1,985,249	+				-0.1
1,985,250	-				-0.1
1,985,250	-				+0.0
1,985,250	-				-0.2
1,985,295	-				+0.1
1,985,295	-				-0.8
1,985,300	+				-0.1
1,985,300	+				-0.1
1,985,301	-				-0.1
1,985,301	-				-0.1
1,985,301	-				-0.5
1,985,389	-				+1.1
1,985,389	-				+1.3
1,985,389	-				+0.4
1,985,564	-		Rru_A1694	0.18	+1.1
1,985,564	-		Rru_A1694	0.18	-0.1
1,985,976	+		Rru_A1694	0.65	+0.8
1,985,999	+		Rru_A1694	0.68	+1.1
1,985,999	+		Rru_A1694	0.68	+1.4
1,986,112	-		Rru_A1694	0.81	-0.1
1,986,120	+		Rru_A1694	0.82	+0.6
1,986,121	-		Rru_A1694	0.82	-0.1
1,986,299	+				+0.2
1,986,299	+				-0.1
1,986,340	+				+0.5
1,986,341	-				-0.1
1,986,475	+				+0.7
1,986,506	-				-0.9
1,986,515	+				+0.5
1,986,524	-				-2.4
1,986,596	-				+1.1
1,986,647	+		Rru_A1695	0.12	+2.8
1,986,647	+		Rru_A1695	0.12	-0.1
1,986,648	-		Rru_A1695	0.12	-0.1
1,986,708	-		Rru_A1695	0.26	+1.5
1,986,778	+		Rru_A1695	0.42	-0.1
1,986,778	+		Rru_A1695	0.42	+0.1
1,986,779	-		Rru_A1695	0.42	+0.4
1,986,779	-		Rru_A1695	0.42	-0.1
1,986,779	-		Rru_A1695	0.42	+0.2
1,986,798	-		Rru_A1695	0.46	-0.1
1,986,829	-		Rru_A1695	0.53	-1.1
1,986,849	+		Rru_A1695	0.58	-0.1
1,986,849	+		Rru_A1695	0.58	+0.7
1,986,849	+		Rru_A1695	0.58	+0.7
1,986,850	-		Rru_A1695	0.58	-0.5
1,986,850	-		Rru_A1695	0.58	+1.5
1,986,850	-		Rru_A1695	0.58	+1.1
1,986,850	-		Rru_A1695	0.58	+0.9
1,986,880	+		Rru_A1695	0.65	+0.5
1,987,055	+				+0.6
1,987,077	+				+0.2
1,987,077	+				-0.1
1,987,110	+		Rru_A1696	0.10	+0.5
1,987,110	+		Rru_A1696	0.10	-0.1
1,987,110	+		Rru_A1696	0.10	+0.4
1,987,110	+		Rru_A1696	0.10	-0.1
1,987,177	-		Rru_A1696	0.23	-0.1