Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1693

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,983,215	+				-1.6
1,983,215	+				-0.1
1,983,215	+				-0.1
1,983,216	-				-1.1
1,983,216	-				-0.1
1,983,216	-				-0.1
1,983,216	-				-1.1
1,983,255	+				-0.1
1,983,304	+				-0.1
1,983,304	+				-0.1
1,983,305	-				-0.1
1,983,305	-				-0.1
1,983,310	-				-1.6
1,983,317	+				-0.1
1,983,318	-				-0.1
1,983,336	+				-0.1
1,983,337	-				-0.1
1,983,413	+				-0.1
1,983,414	-				-1.1
1,983,414	-				-1.1
1,983,448	+		Rru_A1692	0.13	-0.1
1,983,448	+		Rru_A1692	0.13	-0.1
1,983,448	+		Rru_A1692	0.13	-0.1
1,983,448	+		Rru_A1692	0.13	-0.1
1,983,449	-		Rru_A1692	0.13	-1.6
1,983,449	-		Rru_A1692	0.13	-0.1
1,983,449	-		Rru_A1692	0.13	-0.1
1,983,539	+		Rru_A1692	0.31	-0.1
1,983,741	-		Rru_A1692	0.70	-0.1
1,983,785	+		Rru_A1692	0.79	-1.6
1,983,876	-				-1.6
1,983,891	+				-0.1
1,983,929	+				-0.1
1,984,256	+		Rru_A1693	0.17	+1.3
1,984,257	-		Rru_A1693	0.17	-0.1
1,984,257	-		Rru_A1693	0.17	-0.3
1,984,295	+		Rru_A1693	0.20	-0.1
1,984,295	+		Rru_A1693	0.20	-0.1
1,984,296	-		Rru_A1693	0.20	-0.1
1,984,296	-		Rru_A1693	0.20	-0.5
1,984,296	-		Rru_A1693	0.20	-1.1
1,984,298	+		Rru_A1693	0.21	-1.1
1,984,298	+		Rru_A1693	0.21	+0.6
1,984,298	+		Rru_A1693	0.21	-0.1
1,984,298	+		Rru_A1693	0.21	-0.2
1,984,298	+		Rru_A1693	0.21	-0.4
1,984,298	+		Rru_A1693	0.21	-0.1
1,984,299	-		Rru_A1693	0.21	-0.1
1,984,299	-		Rru_A1693	0.21	-0.1
1,984,299	-		Rru_A1693	0.21	-0.1
1,984,299	-		Rru_A1693	0.21	-0.1
1,984,299	-		Rru_A1693	0.21	-0.1
1,984,299	-		Rru_A1693	0.21	-0.1
1,984,473	-		Rru_A1693	0.34	-0.1
1,984,827	-		Rru_A1693	0.62	-0.3
1,984,844	+		Rru_A1693	0.64	-0.1
1,984,859	+		Rru_A1693	0.65	-0.4
1,984,860	-		Rru_A1693	0.65	-0.1
1,984,860	-		Rru_A1693	0.65	-0.1
1,984,938	-		Rru_A1693	0.71	-0.1
1,984,939	+		Rru_A1693	0.71	+0.2
1,984,940	-		Rru_A1693	0.71	+0.1
1,984,940	-		Rru_A1693	0.71	-0.1
1,984,940	-		Rru_A1693	0.71	-0.1
1,984,940	-		Rru_A1693	0.71	-0.1
1,984,940	-		Rru_A1693	0.71	-0.1
1,985,021	+		Rru_A1693	0.78	+0.2
1,985,021	+		Rru_A1693	0.78	+0.8
1,985,021	+		Rru_A1693	0.78	-0.1
1,985,021	+		Rru_A1693	0.78	+0.6
1,985,021	+		Rru_A1693	0.78	-0.1
1,985,021	+		Rru_A1693	0.78	-0.1
1,985,021	+		Rru_A1693	0.78	+0.5
1,985,021	+		Rru_A1693	0.78	+0.7
1,985,022	-		Rru_A1693	0.78	-0.1
1,985,023	+		Rru_A1693	0.78	+0.4
1,985,162	+		Rru_A1693	0.89	+0.4
1,985,163	-		Rru_A1693	0.89	+0.1
1,985,163	-		Rru_A1693	0.89	-0.1
1,985,163	-		Rru_A1693	0.89	+0.0
1,985,177	+				-0.1
1,985,237	+				+1.3
1,985,238	-				+0.1
1,985,239	+				+1.1
1,985,240	-				-0.1
1,985,240	-				+0.3
1,985,240	-				-0.8
1,985,249	+				+0.6
1,985,249	+				-0.1
1,985,250	-				-0.1
1,985,250	-				+0.0
1,985,250	-				-0.2
1,985,295	-				+0.1
1,985,295	-				-0.8
1,985,300	+				-0.1
1,985,300	+				-0.1
1,985,301	-				-0.1
1,985,301	-				-0.1
1,985,301	-				-0.5
1,985,389	-				+1.1
1,985,389	-				+1.3
1,985,389	-				+0.4
1,985,564	-		Rru_A1694	0.18	+1.1
1,985,564	-		Rru_A1694	0.18	-0.1
1,985,976	+		Rru_A1694	0.65	+0.8
1,985,999	+		Rru_A1694	0.68	+1.1
1,985,999	+		Rru_A1694	0.68	+1.4
1,986,112	-		Rru_A1694	0.81	-0.1
1,986,120	+		Rru_A1694	0.82	+0.6
1,986,121	-		Rru_A1694	0.82	-0.1
1,986,299	+				+0.2
1,986,299	+				-0.1