Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1678

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,966,898	+		Rru_A1677	0.24	-1.1
1,967,345	+		Rru_A1677	0.64	-0.1
1,967,345	+		Rru_A1677	0.64	-0.1
1,967,345	+		Rru_A1677	0.64	+0.5
1,967,345	+		Rru_A1677	0.64	-0.1
1,967,346	-		Rru_A1677	0.64	-0.1
1,967,346	-		Rru_A1677	0.64	-0.1
1,967,346	-		Rru_A1677	0.64	-2.4
1,967,346	-		Rru_A1677	0.64	-0.1
1,967,346	-		Rru_A1677	0.64	+0.9
1,967,472	-		Rru_A1677	0.76	-0.1
1,967,472	-		Rru_A1677	0.76	-1.1
1,967,490	+		Rru_A1677	0.77	-0.1
1,967,490	+		Rru_A1677	0.77	+0.9
1,967,551	+		Rru_A1677	0.83	-0.1
1,967,551	+		Rru_A1677	0.83	-0.1
1,967,561	-		Rru_A1677	0.84	-0.7
1,968,225	+		Rru_A1678	0.27	-3.7
1,968,283	+		Rru_A1678	0.31	-0.1
1,968,283	+		Rru_A1678	0.31	-0.1
1,968,283	+		Rru_A1678	0.31	-0.1
1,968,283	+		Rru_A1678	0.31	-2.4
1,968,383	-		Rru_A1678	0.38	-0.1
1,968,613	+		Rru_A1678	0.54	-1.1
1,968,614	-		Rru_A1678	0.54	-0.1
1,968,693	+		Rru_A1678	0.59	-2.9
1,968,727	+		Rru_A1678	0.62	-2.4
1,969,072	+		Rru_A1678	0.85	-0.1