Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1643

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,930,778	-		Rru_A1642	0.14	+0.5
1,930,869	+		Rru_A1642	0.23	-0.1
1,930,869	+		Rru_A1642	0.23	+1.1
1,930,870	-		Rru_A1642	0.23	-0.1
1,930,870	-		Rru_A1642	0.23	+0.1
1,930,870	-		Rru_A1642	0.23	+0.1
1,930,933	+		Rru_A1642	0.29	+0.6
1,930,959	+		Rru_A1642	0.32	-1.1
1,930,959	+		Rru_A1642	0.32	-0.1
1,930,959	+		Rru_A1642	0.32	-0.1
1,931,026	+		Rru_A1642	0.38	-0.1
1,931,440	-		Rru_A1642	0.79	-0.1
1,931,690	+				+0.1
1,931,691	-				-1.8
1,931,691	-				-0.5
1,931,721	-				-0.3
1,931,748	+				+0.0
1,931,749	-				-0.1
1,931,749	-				-0.1
1,931,814	+				-0.3
1,931,815	-				-0.1
1,931,815	-				-1.1
1,931,815	-				-0.1
1,931,815	-				-0.7
1,931,815	-				-1.1
1,931,816	+				-0.1
1,931,817	-				-2.8
1,931,901	+		Rru_A1643	0.20	+0.7
1,932,123	+		Rru_A1643	0.48	+0.3
1,932,124	-		Rru_A1643	0.48	-1.7
1,932,124	-		Rru_A1643	0.48	-0.1
1,932,124	-		Rru_A1643	0.48	-0.4
1,932,124	-		Rru_A1643	0.48	-1.2
1,932,165	+		Rru_A1643	0.53	-0.5
1,932,415	-		Rru_A1643	0.85	-0.4
1,932,415	-		Rru_A1643	0.85	+0.9
1,933,253	+				+1.3
1,933,254	-				-0.4
1,933,395	+				-0.1
1,933,395	+				+0.1
1,933,401	+				-0.1
1,933,401	+				-1.1
1,933,401	+				-0.1
1,933,470	-				-0.1
1,933,513	+				-0.2
1,933,514	-				-0.2