Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1639

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,928,379	+				-0.1
1,928,379	+				-0.3
1,928,487	-		Rru_A1637	0.31	-0.1
1,928,537	+		Rru_A1637	0.43	-0.1
1,928,537	+		Rru_A1637	0.43	+1.8
1,928,537	+		Rru_A1637	0.43	-0.1
1,928,537	+		Rru_A1637	0.43	-0.1
1,928,537	+		Rru_A1637	0.43	-0.1
1,928,538	-		Rru_A1637	0.44	+0.5
1,928,538	-		Rru_A1637	0.44	-0.1
1,928,538	-		Rru_A1637	0.44	-0.1
1,928,613	-		Rru_A1637	0.62	-0.1
1,928,624	+		Rru_A1637	0.64	+0.7
1,928,624	+		Rru_A1637	0.64	-0.1
1,928,702	+		Rru_A1637	0.83	-0.1
1,928,702	+		Rru_A1637	0.83	-0.1
1,928,702	+		Rru_A1637	0.83	+0.7
1,928,702	+		Rru_A1637	0.83	-0.1
1,928,702	+		Rru_A1637	0.83	+1.4
1,928,703	-		Rru_A1637	0.83	-0.1
1,928,703	-		Rru_A1637	0.83	-0.1
1,928,703	-		Rru_A1637	0.83	-0.1
1,928,731	-				-0.1
1,928,910	-		Rru_A1638	0.23	+0.5
1,928,948	+		Rru_A1638	0.29	+0.7
1,928,949	-		Rru_A1638	0.29	+1.2
1,928,986	+		Rru_A1638	0.36	-1.7
1,928,986	+		Rru_A1638	0.36	+0.8
1,928,986	+		Rru_A1638	0.36	-0.1
1,928,986	+		Rru_A1638	0.36	+0.9
1,928,986	+		Rru_A1638	0.36	-0.1
1,928,987	-		Rru_A1638	0.36	-0.1
1,928,987	-		Rru_A1638	0.36	-0.1
1,929,506	+		Rru_A1639	0.39	-0.1
1,929,506	+		Rru_A1639	0.39	+2.1
1,929,507	-		Rru_A1639	0.40	+1.1
1,929,507	-		Rru_A1639	0.40	-0.1
1,929,507	-		Rru_A1639	0.40	-0.1
1,929,618	+		Rru_A1639	0.71	+0.5
1,929,619	-		Rru_A1639	0.72	-0.1
1,929,619	-		Rru_A1639	0.72	-0.1
1,929,619	-		Rru_A1639	0.72	-0.1
1,929,619	-		Rru_A1639	0.72	+1.2
1,929,619	-		Rru_A1639	0.72	-0.1
1,929,619	-		Rru_A1639	0.72	-0.1
1,929,822	-		Rru_A1640	0.36	-0.1
1,929,906	+		Rru_A1640	0.65	-0.1
1,929,907	-		Rru_A1640	0.65	+1.3
1,929,907	-		Rru_A1640	0.65	-0.1
1,929,929	+		Rru_A1640	0.73	-0.1
1,929,930	-		Rru_A1640	0.73	-0.1
1,929,930	-		Rru_A1640	0.73	+0.4
1,930,227	-		Rru_A1641	0.45	+0.0
1,930,227	-		Rru_A1641	0.45	-0.1
1,930,303	+		Rru_A1641	0.61	+3.6
1,930,303	+		Rru_A1641	0.61	+2.7
1,930,303	+		Rru_A1641	0.61	-1.1
1,930,303	+		Rru_A1641	0.61	-0.1
1,930,303	+		Rru_A1641	0.61	-0.1
1,930,304	-		Rru_A1641	0.61	-0.1
1,930,304	-		Rru_A1641	0.61	-0.1
1,930,304	-		Rru_A1641	0.61	+1.3
1,930,304	-		Rru_A1641	0.61	-0.1
1,930,515	+				+0.6
1,930,516	-				-0.8
1,930,563	-				-0.3
1,930,563	-				-0.3
1,930,564	+				+0.7
1,930,564	+				-0.1
1,930,564	+				+1.9
1,930,565	-				-0.7
1,930,663	-				-2.3
1,930,663	-				+0.1