Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1627

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,918,410	+		Rru_A1625	0.82	-1.1
1,918,410	+		Rru_A1625	0.82	+0.6
1,918,410	+		Rru_A1625	0.82	-0.1
1,918,410	+		Rru_A1625	0.82	+0.6
1,918,410	+		Rru_A1625	0.82	-0.1
1,918,411	-		Rru_A1625	0.82	-0.1
1,918,411	-		Rru_A1625	0.82	-0.1
1,918,411	-		Rru_A1625	0.82	-0.1
1,918,488	+				+0.7
1,918,544	-				+0.6
1,918,544	-				-0.1
1,918,596	+				+1.5
1,918,899	+		Rru_A1626	0.55	-0.1
1,918,900	-		Rru_A1626	0.55	+0.3
1,918,900	-		Rru_A1626	0.55	+0.4
1,919,041	+		Rru_A1626	0.78	-1.1
1,919,041	+		Rru_A1626	0.78	+0.8
1,919,222	+				+0.7
1,919,234	-				-1.7
1,919,377	+		Rru_A1627	0.28	-2.1
1,919,378	-		Rru_A1627	0.28	-0.1
1,919,378	-		Rru_A1627	0.28	-0.1
1,919,378	-		Rru_A1627	0.28	-0.4
1,920,093	-				-1.7
1,920,179	+		Rru_A1629	0.13	-0.3
1,920,180	-		Rru_A1629	0.13	+0.0
1,920,331	+		Rru_A1629	0.21	-0.1
1,920,331	+		Rru_A1629	0.21	+0.6
1,920,331	+		Rru_A1629	0.21	+0.4
1,920,551	+		Rru_A1629	0.32	-0.1
1,920,557	-		Rru_A1629	0.33	+0.2