Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1602

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,887,646	-				+2.6
1,887,646	-				+1.5
1,887,651	-				+1.9
1,887,651	-				-0.1
1,887,651	-				+1.5
1,887,651	-				+1.9
1,887,651	-				-0.1
1,887,651	-				+0.9
1,887,651	-				-2.4
1,887,651	-				+2.7
1,887,861	+				+1.1
1,887,862	-				-1.1
1,888,070	-		Rru_A1602	0.17	+1.2
1,888,070	-		Rru_A1602	0.17	+0.4
1,888,070	-		Rru_A1602	0.17	+1.2
1,888,070	-		Rru_A1602	0.17	+1.5
1,888,580	+		Rru_A1602	0.40	-0.1
1,888,581	-		Rru_A1602	0.40	+1.5
1,888,581	-		Rru_A1602	0.40	-0.1
1,888,581	-		Rru_A1602	0.40	+0.8
1,888,581	-		Rru_A1602	0.40	+0.7
1,888,581	-		Rru_A1602	0.40	-0.1
1,888,707	+		Rru_A1602	0.46	+1.1
1,888,917	+		Rru_A1602	0.56	+0.5
1,888,917	+		Rru_A1602	0.56	+0.3
1,888,917	+		Rru_A1602	0.56	+0.2
1,888,918	-		Rru_A1602	0.56	+0.8
1,888,918	-		Rru_A1602	0.56	+0.4
1,888,918	-		Rru_A1602	0.56	+0.2
1,888,918	-		Rru_A1602	0.56	+0.0
1,888,992	+		Rru_A1602	0.59	-0.3
1,888,992	+		Rru_A1602	0.59	+1.1
1,889,056	-		Rru_A1602	0.62	-0.1
1,889,096	+		Rru_A1602	0.64	+0.8
1,889,096	+		Rru_A1602	0.64	-0.1
1,889,097	-		Rru_A1602	0.64	+0.9
1,889,097	-		Rru_A1602	0.64	-0.2
1,889,610	+		Rru_A1602	0.87	-1.1
1,889,696	-				-0.1
1,890,192	+		Rru_A1603	0.39	-0.1
1,890,192	+		Rru_A1603	0.39	-0.1
1,890,192	+		Rru_A1603	0.39	-0.1
1,890,192	+		Rru_A1603	0.39	-0.1
1,890,193	-		Rru_A1603	0.39	-0.1
1,890,194	+		Rru_A1603	0.40	-0.1
1,890,194	+		Rru_A1603	0.40	-0.1
1,890,194	+		Rru_A1603	0.40	-0.1
1,890,194	+		Rru_A1603	0.40	+0.7
1,890,194	+		Rru_A1603	0.40	-0.1
1,890,194	+		Rru_A1603	0.40	-0.1
1,890,194	+		Rru_A1603	0.40	-0.1
1,890,195	-		Rru_A1603	0.40	-0.1
1,890,195	-		Rru_A1603	0.40	-0.1
1,890,195	-		Rru_A1603	0.40	-0.1
1,890,279	-		Rru_A1603	0.52	+1.2
1,890,396	+		Rru_A1603	0.68	-0.1
1,890,396	+		Rru_A1603	0.68	+0.0
1,890,397	-		Rru_A1603	0.68	-0.1
1,890,428	+		Rru_A1603	0.73	+0.9
1,890,429	-		Rru_A1603	0.73	-0.1
1,890,429	-		Rru_A1603	0.73	-0.1
1,890,429	-		Rru_A1603	0.73	-0.1
1,890,536	+		Rru_A1603	0.88	-0.1
1,890,537	-		Rru_A1603	0.88	+0.7