Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1575

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,855,175	+		Rru_A1574	0.13	+0.5
1,855,175	+		Rru_A1574	0.13	+0.2
1,855,175	+		Rru_A1574	0.13	+0.5
1,855,223	+		Rru_A1574	0.26	-0.1
1,855,223	+		Rru_A1574	0.26	+0.1
1,855,223	+		Rru_A1574	0.26	-0.1
1,855,223	+		Rru_A1574	0.26	+0.3
1,855,223	+		Rru_A1574	0.26	+0.7
1,855,223	+		Rru_A1574	0.26	+0.1
1,855,223	+		Rru_A1574	0.26	-0.3
1,855,224	-		Rru_A1574	0.26	-0.1
1,855,226	+		Rru_A1574	0.26	-0.1
1,855,227	-		Rru_A1574	0.27	+1.2
1,855,227	-		Rru_A1574	0.27	-0.1
1,855,238	+		Rru_A1574	0.30	+0.1
1,855,238	+		Rru_A1574	0.30	-0.1
1,855,391	-		Rru_A1574	0.70	+0.6
1,855,391	-		Rru_A1574	0.70	+0.1
1,855,415	+		Rru_A1574	0.76	-0.1
1,855,415	+		Rru_A1574	0.76	-0.8
1,855,415	+		Rru_A1574	0.76	+0.6
1,855,469	+				-0.3
1,855,597	+				+0.7
1,855,598	-				-0.1
1,855,598	-				+0.4
1,855,620	+				+0.6
1,855,621	-				-0.1
1,855,621	-				-0.1
1,855,621	-				-0.1
1,855,624	-				-0.1
1,855,624	-				-0.1
1,855,624	-				-0.1
1,855,624	-				+0.5
1,855,647	-				-0.1
1,856,007	+				-1.4
1,856,081	-				-0.1
1,856,123	-				+0.7
1,856,148	+				+0.1
1,856,314	+		Rru_A1575	0.36	-0.3
1,856,315	-		Rru_A1575	0.36	+0.7
1,856,315	-		Rru_A1575	0.36	+1.6
1,856,372	+		Rru_A1575	0.46	-1.0
1,856,372	+		Rru_A1575	0.46	+0.2
1,856,372	+		Rru_A1575	0.46	-1.3
1,856,373	-		Rru_A1575	0.46	+0.9
1,856,373	-		Rru_A1575	0.46	+0.5
1,856,373	-		Rru_A1575	0.46	-2.1
1,856,429	+		Rru_A1575	0.57	-0.1
1,856,430	-		Rru_A1575	0.57	+0.7
1,856,540	+		Rru_A1575	0.77	-0.1
1,856,540	+		Rru_A1575	0.77	-0.1
1,856,540	+		Rru_A1575	0.77	-1.1
1,856,540	+		Rru_A1575	0.77	-0.1
1,856,541	-		Rru_A1575	0.77	+1.2
1,856,541	-		Rru_A1575	0.77	-1.7
1,856,543	-		Rru_A1575	0.77	-0.1
1,856,558	+		Rru_A1575	0.80	-0.2
1,856,558	+		Rru_A1575	0.80	-0.6
1,856,558	+		Rru_A1575	0.80	-0.1