Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1548

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,823,397	-		Rru_A1547	0.44	-0.1
1,823,472	+		Rru_A1547	0.48	+2.0
1,823,472	+		Rru_A1547	0.48	+1.8
1,823,473	-		Rru_A1547	0.48	-0.1
1,823,473	-		Rru_A1547	0.48	-0.1
1,823,608	+		Rru_A1547	0.57	+2.7
1,823,608	+		Rru_A1547	0.57	+2.6
1,823,608	+		Rru_A1547	0.57	-0.1
1,823,608	+		Rru_A1547	0.57	-0.1
1,824,521	+		Rru_A1548	0.15	-0.1
1,824,521	+		Rru_A1548	0.15	-1.1
1,824,521	+		Rru_A1548	0.15	-0.1
1,824,521	+		Rru_A1548	0.15	-0.1
1,824,521	+		Rru_A1548	0.15	-2.0
1,824,522	-		Rru_A1548	0.15	-1.9
1,824,522	-		Rru_A1548	0.15	-2.7
1,824,522	-		Rru_A1548	0.15	-0.1
1,824,522	-		Rru_A1548	0.15	-0.8
1,824,923	+		Rru_A1548	0.43	-1.6
1,824,923	+		Rru_A1548	0.43	-0.1
1,824,923	+		Rru_A1548	0.43	-0.1
1,824,923	+		Rru_A1548	0.43	-1.6
1,824,923	+		Rru_A1548	0.43	-2.1
1,824,923	+		Rru_A1548	0.43	-1.5
1,824,924	-		Rru_A1548	0.43	-0.1
1,824,924	-		Rru_A1548	0.43	-1.3
1,824,924	-		Rru_A1548	0.43	-2.2
1,824,924	-		Rru_A1548	0.43	-1.1
1,824,924	-		Rru_A1548	0.43	-1.3
1,824,924	-		Rru_A1548	0.43	-0.5
1,824,924	-		Rru_A1548	0.43	-0.1
1,824,924	-		Rru_A1548	0.43	-0.1
1,824,924	-		Rru_A1548	0.43	-0.1
1,824,992	+		Rru_A1548	0.48	-2.4
1,824,993	-		Rru_A1548	0.48	-2.3
1,825,140	-		Rru_A1548	0.58	-2.6
1,825,473	-		Rru_A1548	0.81	-0.1
1,825,523	+		Rru_A1548	0.85	-3.1
1,825,523	+		Rru_A1548	0.85	-0.1
1,825,523	+		Rru_A1548	0.85	-1.9
1,825,524	-		Rru_A1548	0.85	-2.4
1,825,524	-		Rru_A1548	0.85	-1.4
1,825,637	+				-0.1
1,825,637	+				-0.1
1,825,638	-				-0.3
1,825,638	-				-0.1
1,825,638	-				-0.1
1,825,638	-				-3.5
1,825,638	-				-0.9
1,825,643	+				-0.1
1,825,643	+				-1.3
1,825,643	+				+0.9
1,825,644	-				-0.1
1,825,644	-				-0.5
1,825,644	-				-2.6
1,825,644	-				-0.1
1,825,644	-				-0.1
1,825,645	+				-2.2
1,825,646	-				-0.8
1,825,646	-				-1.1
1,825,680	-				-2.2
1,825,680	-				-1.5
1,825,737	-				-0.1
1,826,016	+				-0.3
1,826,059	+				-0.1
1,826,114	+				+1.2
1,826,115	-				-0.1
1,826,115	-				-0.1
1,826,633	+		Rru_A1549	0.44	-0.1
1,826,633	+		Rru_A1549	0.44	-0.1
1,826,633	+		Rru_A1549	0.44	+0.9
1,826,634	-		Rru_A1549	0.44	-0.1
1,826,634	-		Rru_A1549	0.44	-0.1