Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1542

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,814,646	+		Rru_A1541	0.28	-0.1
1,814,728	+		Rru_A1541	0.34	-0.1
1,814,729	-		Rru_A1541	0.34	-0.1
1,814,729	-		Rru_A1541	0.34	-1.1
1,814,824	-		Rru_A1541	0.41	+0.1
1,814,989	+		Rru_A1541	0.53	+0.6
1,815,023	-		Rru_A1541	0.56	+1.2
1,815,023	-		Rru_A1541	0.56	+1.4
1,815,023	-		Rru_A1541	0.56	+0.2
1,815,114	+		Rru_A1541	0.63	+0.2
1,815,188	-		Rru_A1541	0.68	+0.4
1,815,188	-		Rru_A1541	0.68	-0.1
1,815,188	-		Rru_A1541	0.68	-0.1
1,815,244	+		Rru_A1541	0.72	+0.0
1,815,245	-		Rru_A1541	0.72	-0.4
1,815,246	+		Rru_A1541	0.72	-0.1
1,815,246	+		Rru_A1541	0.72	-0.1
1,815,247	-		Rru_A1541	0.73	-0.1
1,815,247	-		Rru_A1541	0.73	+0.3
1,815,247	-		Rru_A1541	0.73	+1.1
1,815,247	-		Rru_A1541	0.73	-2.1
1,815,247	-		Rru_A1541	0.73	+1.1
1,815,247	-		Rru_A1541	0.73	-1.1
1,815,247	-		Rru_A1541	0.73	+2.0
1,815,247	-		Rru_A1541	0.73	+0.1
1,815,250	+		Rru_A1541	0.73	+0.4
1,815,250	+		Rru_A1541	0.73	-0.1
1,815,250	+		Rru_A1541	0.73	-0.1
1,815,251	-		Rru_A1541	0.73	-0.1
1,815,251	-		Rru_A1541	0.73	+0.9
1,815,251	-		Rru_A1541	0.73	-0.1
1,815,406	+		Rru_A1541	0.84	-0.1
1,815,406	+		Rru_A1541	0.84	+1.2
1,815,406	+		Rru_A1541	0.84	+0.5
1,815,407	-		Rru_A1541	0.84	-0.1
1,815,499	+				+0.0
1,815,500	-				+0.8
1,815,502	+				-0.1
1,815,503	-				+0.4
1,815,503	-				+2.2
1,815,503	-				+0.4
1,815,503	-				+0.3
1,815,700	-				-0.1
1,815,964	+		Rru_A1542	0.22	+0.7
1,815,965	-		Rru_A1542	0.22	+0.4
1,815,965	-		Rru_A1542	0.22	+0.3
1,815,965	-		Rru_A1542	0.22	-0.1
1,816,080	+		Rru_A1542	0.30	-0.1
1,816,149	+		Rru_A1542	0.34	+0.7
1,816,149	+		Rru_A1542	0.34	-0.1
1,816,150	-		Rru_A1542	0.34	+0.7
1,816,249	-		Rru_A1542	0.41	-0.1
1,816,327	+		Rru_A1542	0.46	+1.5
1,816,327	+		Rru_A1542	0.46	+0.4
1,816,327	+		Rru_A1542	0.46	-0.1
1,816,327	+		Rru_A1542	0.46	-0.1
1,816,328	-		Rru_A1542	0.46	+0.6
1,816,328	-		Rru_A1542	0.46	-0.8
1,816,328	-		Rru_A1542	0.46	+0.2
1,816,333	+		Rru_A1542	0.47	+0.7
1,816,333	+		Rru_A1542	0.47	-0.1
1,816,334	-		Rru_A1542	0.47	+0.9
1,816,334	-		Rru_A1542	0.47	-0.1
1,816,334	-		Rru_A1542	0.47	+1.3
1,816,626	+		Rru_A1542	0.66	+0.1
1,816,639	+		Rru_A1542	0.67	+0.2
1,816,639	+		Rru_A1542	0.67	+1.0
1,816,640	-		Rru_A1542	0.67	-1.7
1,816,640	-		Rru_A1542	0.67	+1.2
1,816,771	+		Rru_A1542	0.76	+0.8
1,816,771	+		Rru_A1542	0.76	+1.5
1,816,869	+		Rru_A1542	0.82	-0.1
1,816,869	+		Rru_A1542	0.82	-1.1
1,816,869	+		Rru_A1542	0.82	+1.4
1,816,869	+		Rru_A1542	0.82	-1.1
1,816,869	+		Rru_A1542	0.82	-0.1
1,816,870	-		Rru_A1542	0.82	+0.1
1,816,907	-		Rru_A1542	0.85	-0.1
1,817,023	+				-0.1
1,817,024	-				-0.1
1,817,047	+				-0.1
1,817,050	-				-0.3
1,817,131	+				+0.3
1,817,131	+				-0.4
1,817,131	+				-0.2
1,817,132	-				+0.4
1,817,132	-				-0.1
1,817,239	+		Rru_A1543	0.11	+1.1
1,817,240	-		Rru_A1543	0.11	-0.1
1,817,695	+		Rru_A1543	0.64	+0.7
1,817,695	+		Rru_A1543	0.64	+0.9
1,817,695	+		Rru_A1543	0.64	-0.1
1,817,695	+		Rru_A1543	0.64	-0.1
1,817,695	+		Rru_A1543	0.64	+1.8
1,817,696	-		Rru_A1543	0.64	-0.1
1,817,696	-		Rru_A1543	0.64	-1.7
1,818,095	+				+1.2
1,818,097	+				-0.0