Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1535

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,807,696	-		Rru_A1534	0.51	+0.1
1,807,811	+		Rru_A1534	0.59	-0.2
1,807,811	+		Rru_A1534	0.59	+0.1
1,807,811	+		Rru_A1534	0.59	+0.2
1,807,812	-		Rru_A1534	0.59	+0.6
1,807,812	-		Rru_A1534	0.59	-0.2
1,807,812	-		Rru_A1534	0.59	-0.1
1,807,900	+		Rru_A1534	0.64	+1.0
1,807,900	+		Rru_A1534	0.64	+0.8
1,807,988	+		Rru_A1534	0.70	+0.0
1,807,989	-		Rru_A1534	0.70	+0.6
1,808,078	+		Rru_A1534	0.76	+1.5
1,808,078	+		Rru_A1534	0.76	+0.3
1,808,079	-		Rru_A1534	0.76	-0.1
1,808,079	-		Rru_A1534	0.76	+0.9
1,808,583	+		Rru_A1535	0.14	-0.1
1,808,583	+		Rru_A1535	0.14	-0.1
1,808,584	-		Rru_A1535	0.15	-0.6
1,808,584	-		Rru_A1535	0.15	-0.1
1,808,628	+		Rru_A1535	0.26	-0.2
1,808,629	-		Rru_A1535	0.27	-0.4
1,808,629	-		Rru_A1535	0.27	-0.1
1,808,672	+		Rru_A1535	0.38	-0.8
1,808,672	+		Rru_A1535	0.38	+0.2
1,808,673	-		Rru_A1535	0.38	+0.2
1,808,696	+		Rru_A1535	0.45	-0.1
1,808,697	-		Rru_A1535	0.45	-0.1
1,808,697	-		Rru_A1535	0.45	+0.1
1,808,918	+				-0.1
1,808,918	+				-0.1
1,808,919	-				+0.2
1,808,923	+				-0.1
1,808,929	+				-0.5
1,808,929	+				-0.2
1,808,929	+				-0.2
1,808,930	-				-0.1
1,808,930	-				-0.1
1,808,930	-				+0.6
1,809,032	+				-0.1
1,809,033	-				+0.6
1,809,033	-				+0.4
1,809,033	-				-1.7
1,809,033	-				-0.1
1,809,033	-				+3.7
1,809,033	-				+1.1
1,809,070	+				+1.0
1,809,070	+				-0.1
1,809,070	+				+0.1
1,809,070	+				-1.1
1,809,071	-				-0.1
1,809,071	-				+0.0
1,809,071	-				+0.1
1,809,634	+		Rru_A1536	0.24	-0.1
1,809,661	+		Rru_A1536	0.25	-0.1
1,809,662	-		Rru_A1536	0.25	-0.1
1,809,670	+		Rru_A1536	0.26	-0.1
1,809,787	+		Rru_A1536	0.31	-0.1
1,809,829	+		Rru_A1536	0.33	-0.1
1,809,830	-		Rru_A1536	0.33	-0.1
1,809,867	+		Rru_A1536	0.34	-0.1
1,809,868	-		Rru_A1536	0.34	-0.1
1,809,868	-		Rru_A1536	0.34	-0.1