Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1513

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,785,494	+		Rru_A1511	0.75	-0.4
1,785,495	-		Rru_A1511	0.75	+0.8
1,785,495	-		Rru_A1511	0.75	-0.1
1,785,796	+				-0.3
1,785,821	+				-0.1
1,785,821	+				-0.3
1,785,821	+				+0.5
1,785,821	+				-0.1
1,785,821	+				+1.2
1,785,822	-				-0.3
1,785,822	-				-0.1
1,785,822	-				-0.1
1,785,896	+				+0.1
1,785,897	-				+0.0
1,785,930	-				+0.1
1,785,941	+				-0.9
1,785,942	-				-0.1
1,785,944	+				-0.1
1,785,944	+				-0.1
1,785,945	-				-0.1
1,785,964	+				-0.1
1,785,964	+				+0.3
1,785,965	-				-0.1
1,785,965	-				-0.0
1,786,076	-		Rru_A1512	0.18	-0.1
1,786,076	-		Rru_A1512	0.18	-0.1
1,786,205	-		Rru_A1512	0.62	-0.1
1,786,252	+		Rru_A1512	0.78	-0.1
1,786,252	+		Rru_A1512	0.78	-1.4
1,786,252	+		Rru_A1512	0.78	-0.1
1,786,252	+		Rru_A1512	0.78	+0.2
1,786,252	+		Rru_A1512	0.78	-0.1
1,786,252	+		Rru_A1512	0.78	+0.3
1,786,252	+		Rru_A1512	0.78	+0.2
1,786,253	-		Rru_A1512	0.78	-0.1
1,786,253	-		Rru_A1512	0.78	+0.9
1,786,265	-		Rru_A1512	0.82	-1.4
1,786,399	+		Rru_A1513	0.21	-0.6
1,786,400	-		Rru_A1513	0.22	-1.1
1,786,597	+		Rru_A1513	0.70	+0.1
1,786,598	-		Rru_A1513	0.70	+0.3
1,786,723	+				-0.1
1,786,724	-				-0.5
1,786,724	-				+0.1
1,786,724	-				-0.4
1,786,739	-				-0.1
1,786,881	-				+0.4
1,787,090	-				-0.1
1,787,253	-				-1.7
1,787,253	-				-0.1
1,787,253	-				-0.1
1,787,286	+				-0.1
1,787,287	-				-0.8
1,787,312	-				-0.1
1,787,326	+				+0.3
1,787,327	-				-1.1
1,787,337	-				-1.1
1,787,337	-				+0.7
1,787,350	+				-0.1
1,787,351	-				-0.1
1,787,369	+				-0.1
1,787,370	-				-0.1
1,787,493	+				+0.8
1,787,503	-				-0.7
1,787,505	+				-0.1
1,787,505	+				-0.1
1,787,633	+				-0.1
1,787,633	+				-0.1
1,787,633	+				-0.1
1,787,633	+				+0.5
1,787,634	-				+0.3
1,787,634	-				+0.4
1,787,634	-				+0.3
1,787,634	-				-0.1
1,787,635	+				-1.1
1,787,635	+				-0.1
1,787,636	-				-1.2
1,787,636	-				+0.1
1,787,645	+				+1.9
1,787,645	+				+0.4
1,787,670	-				-0.1
1,787,719	+				+0.2
1,787,719	+				-0.1