Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1502

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,775,735	-				+0.1
1,775,772	-				+0.1
1,775,824	+				+0.7
1,775,897	+				-0.1
1,775,898	-				-0.1
1,776,125	+		Rru_A1501	0.32	-0.1
1,776,126	-		Rru_A1501	0.33	+0.2
1,776,126	-		Rru_A1501	0.33	+0.7
1,776,126	-		Rru_A1501	0.33	+0.6
1,776,203	+		Rru_A1501	0.57	+0.9
1,776,215	+		Rru_A1501	0.61	+0.8
1,776,215	+		Rru_A1501	0.61	+0.7
1,776,216	-		Rru_A1501	0.61	+0.3
1,776,335	+				+1.5
1,776,336	-				-0.1
1,776,389	+				-0.1
1,776,389	+				-0.1
1,776,389	+				+2.1
1,776,390	-				-0.8
1,776,395	-				+0.2
1,776,407	+				-0.1
1,776,407	+				-0.1
1,776,407	+				-0.1
1,776,407	+				+1.1
1,776,408	-				-0.1
1,776,408	-				+0.8
1,776,408	-				-0.1
1,776,426	+				-1.1
1,776,426	+				-0.1
1,776,880	+				-0.1
1,776,893	+				-0.1
1,776,893	+				+0.9
1,776,903	-				+0.3
1,777,102	+		Rru_A1503	0.27	-0.1
1,777,102	+		Rru_A1503	0.27	+0.8
1,777,102	+		Rru_A1503	0.27	-0.1
1,777,102	+		Rru_A1503	0.27	-1.1
1,777,102	+		Rru_A1503	0.27	+0.6
1,777,102	+		Rru_A1503	0.27	+0.9
1,777,103	-		Rru_A1503	0.27	-1.1
1,777,103	-		Rru_A1503	0.27	+1.0
1,777,103	-		Rru_A1503	0.27	+1.0
1,777,372	+		Rru_A1503	0.52	+0.3
1,777,373	-		Rru_A1503	0.52	+0.3
1,777,474	+		Rru_A1503	0.61	+0.6
1,777,493	+		Rru_A1503	0.63	+1.1
1,777,494	-		Rru_A1503	0.63	+0.5
1,777,519	+		Rru_A1503	0.65	+0.3
1,777,519	+		Rru_A1503	0.65	-0.1
1,777,519	+		Rru_A1503	0.65	-0.1
1,777,519	+		Rru_A1503	0.65	+0.0
1,777,519	+		Rru_A1503	0.65	+0.2
1,777,519	+		Rru_A1503	0.65	+0.0
1,777,520	-		Rru_A1503	0.66	+0.4
1,777,546	+		Rru_A1503	0.68	+0.5
1,777,546	+		Rru_A1503	0.68	+0.8
1,777,547	-		Rru_A1503	0.68	-0.1
1,777,547	-		Rru_A1503	0.68	+0.5
1,777,547	-		Rru_A1503	0.68	-0.1
1,777,547	-		Rru_A1503	0.68	-0.9
1,777,638	-		Rru_A1503	0.76	+0.7