Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1486

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,753,968	-		Rru_A1485	0.36	+0.0
1,754,142	-		Rru_A1485	0.48	-0.1
1,754,182	+		Rru_A1485	0.51	-0.1
1,754,183	-		Rru_A1485	0.51	-1.7
1,754,183	-		Rru_A1485	0.51	-0.1
1,754,183	-		Rru_A1485	0.51	-0.1
1,754,183	-		Rru_A1485	0.51	-0.1
1,754,216	+		Rru_A1485	0.53	+0.9
1,754,283	+		Rru_A1485	0.58	+1.0
1,754,284	-		Rru_A1485	0.58	+0.8
1,754,288	-		Rru_A1485	0.58	-0.1
1,754,288	-		Rru_A1485	0.58	+0.0
1,754,288	-		Rru_A1485	0.58	-0.1
1,754,897	+				+0.8
1,754,898	-				+0.7
1,755,205	+		Rru_A1486	0.33	+0.2
1,755,206	-		Rru_A1486	0.33	+0.9
1,755,207	+		Rru_A1486	0.33	+0.4
1,755,208	-		Rru_A1486	0.33	+1.1
1,755,208	-		Rru_A1486	0.33	+0.6
1,755,208	-		Rru_A1486	0.33	+0.4
1,755,429	+		Rru_A1486	0.56	+1.2
1,755,429	+		Rru_A1486	0.56	+0.7
1,755,429	+		Rru_A1486	0.56	+0.5
1,755,429	+		Rru_A1486	0.56	-0.1
1,755,429	+		Rru_A1486	0.56	+0.5
1,755,430	-		Rru_A1486	0.56	-0.1
1,755,430	-		Rru_A1486	0.56	+0.0
1,755,430	-		Rru_A1486	0.56	+0.7
1,755,430	-		Rru_A1486	0.56	-0.1
1,755,433	+		Rru_A1486	0.56	+1.0
1,755,433	+		Rru_A1486	0.56	-0.1
1,755,434	-		Rru_A1486	0.56	+1.2
1,755,486	+		Rru_A1486	0.62	+1.0
1,755,486	+		Rru_A1486	0.62	+0.5
1,755,487	-		Rru_A1486	0.62	+2.1
1,755,575	-		Rru_A1486	0.71	+0.6
1,755,575	-		Rru_A1486	0.71	+0.2
1,755,677	-		Rru_A1486	0.81	+0.7
1,755,677	-		Rru_A1486	0.81	-0.2
1,755,895	+				+0.7
1,755,944	+				-0.1
1,755,944	+				-1.1
1,755,945	-				+0.7
1,755,945	-				-0.1
1,755,946	+				+0.2
1,755,946	+				+0.5
1,755,946	+				+1.0
1,755,946	+				-1.7
1,755,946	+				-0.1
1,755,946	+				-0.3
1,755,946	+				-0.1
1,755,947	-				+1.3
1,755,947	-				+1.1
1,755,947	-				+0.9
1,755,947	-				+0.1
1,755,947	-				+0.8
1,755,947	-				+1.3
1,755,947	-				-0.1
1,755,947	-				+0.3
1,755,947	-				+0.7
1,755,947	-				-0.1
1,755,961	+		Rru_A1487	0.12	+2.2
1,755,961	+		Rru_A1487	0.12	+0.9
1,756,074	-		Rru_A1487	0.31	-0.1
1,756,075	+		Rru_A1487	0.31	-0.2
1,756,075	+		Rru_A1487	0.31	-1.1
1,756,075	+		Rru_A1487	0.31	+0.0
1,756,075	+		Rru_A1487	0.31	-0.1
1,756,076	-		Rru_A1487	0.31	-0.1
1,756,076	-		Rru_A1487	0.31	-0.1
1,756,076	-		Rru_A1487	0.31	+0.6
1,756,115	-		Rru_A1487	0.38	+0.6
1,756,162	-		Rru_A1487	0.46	+0.5
1,756,166	-		Rru_A1487	0.47	+0.8
1,756,166	-		Rru_A1487	0.47	+0.2
1,756,192	-		Rru_A1487	0.51	+0.7
1,756,498	-				+0.3
1,756,571	+				-1.1
1,756,571	+				+0.7
1,756,578	+				+0.2
1,756,578	+				-0.1
1,756,579	-				-0.2
1,756,579	-				+0.8
1,756,586	+				-0.1
1,756,650	+				+0.5
1,756,730	+		Rru_A1488	0.10	-0.1
1,756,745	-		Rru_A1488	0.12	+1.3
1,756,841	+		Rru_A1488	0.24	+0.4
1,756,853	+		Rru_A1488	0.26	-0.1
1,756,854	-		Rru_A1488	0.26	-0.1
1,756,854	-		Rru_A1488	0.26	-0.1
1,756,854	-		Rru_A1488	0.26	+0.3
1,756,854	-		Rru_A1488	0.26	-0.1
1,756,854	-		Rru_A1488	0.26	-1.7