Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1463

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,729,049	+				-0.1
1,729,142	+				+0.9
1,729,143	-				+0.2
1,729,148	-				-0.1
1,729,222	-				+0.1
1,729,223	+				+0.6
1,729,224	-				+0.9
1,729,331	+		Rru_A1462	0.16	-0.1
1,729,632	-		Rru_A1462	0.57	-0.1
1,729,735	+		Rru_A1462	0.71	+0.3
1,729,735	+		Rru_A1462	0.71	+0.3
1,729,735	+		Rru_A1462	0.71	+1.2
1,729,735	+		Rru_A1462	0.71	-0.1
1,729,735	+		Rru_A1462	0.71	-0.5
1,729,735	+		Rru_A1462	0.71	+0.5
1,729,736	-		Rru_A1462	0.71	+1.1
1,729,736	-		Rru_A1462	0.71	-0.1
1,729,736	-		Rru_A1462	0.71	+0.6
1,729,736	-		Rru_A1462	0.71	+0.3
1,729,736	-		Rru_A1462	0.71	-0.9
1,729,736	-		Rru_A1462	0.71	-0.1
1,729,736	-		Rru_A1462	0.71	+2.4
1,729,736	-		Rru_A1462	0.71	-0.1
1,729,736	-		Rru_A1462	0.71	+0.8
1,729,736	-		Rru_A1462	0.71	-0.0
1,729,736	-		Rru_A1462	0.71	-1.1
1,729,737	+		Rru_A1462	0.71	+0.7
1,729,737	+		Rru_A1462	0.71	-0.1
1,729,737	+		Rru_A1462	0.71	+0.7
1,729,738	-		Rru_A1462	0.71	-0.1
1,729,882	+				-0.1
1,729,882	+				-0.5
1,729,884	+				-0.1
1,729,884	+				-0.2
1,729,885	-				-0.1
1,729,885	-				-0.2
1,729,885	-				+1.1
1,730,037	-				+0.4
1,730,037	-				+0.5
1,730,195	-		Rru_A1463	0.28	-1.1
1,730,248	-		Rru_A1463	0.35	+1.8
1,730,341	-		Rru_A1463	0.46	+1.3
1,730,462	-		Rru_A1463	0.60	-0.6
1,730,462	-		Rru_A1463	0.60	-0.1
1,730,463	+		Rru_A1463	0.60	-0.1
1,730,463	+		Rru_A1463	0.60	-1.9
1,730,463	+		Rru_A1463	0.60	-0.1
1,730,464	-		Rru_A1463	0.60	-0.1
1,730,539	+		Rru_A1463	0.69	+0.7
1,730,578	+		Rru_A1463	0.74	-0.1
1,730,578	+		Rru_A1463	0.74	-0.2
1,730,578	+		Rru_A1463	0.74	+0.0
1,730,578	+		Rru_A1463	0.74	-0.1
1,730,579	-		Rru_A1463	0.74	-0.1
1,730,579	-		Rru_A1463	0.74	-0.9
1,730,579	-		Rru_A1463	0.74	-0.1
1,730,579	-		Rru_A1463	0.74	+0.2
1,730,579	-		Rru_A1463	0.74	-0.1
1,730,580	+		Rru_A1463	0.74	+0.8
1,730,580	+		Rru_A1463	0.74	-0.3
1,730,580	+		Rru_A1463	0.74	-0.1
1,730,581	-		Rru_A1463	0.74	+0.2
1,730,581	-		Rru_A1463	0.74	-0.1
1,730,581	-		Rru_A1463	0.74	+0.3
1,731,024	+		Rru_A1464	0.25	+0.4
1,731,026	+		Rru_A1464	0.26	+0.9
1,731,026	+		Rru_A1464	0.26	-0.1
1,731,027	-		Rru_A1464	0.26	+0.5
1,731,027	-		Rru_A1464	0.26	-0.1
1,731,027	-		Rru_A1464	0.26	+0.5